RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-210ENST00000521122 KCNK12Q9HB15 430 aa10.57□□□□□ -0.72
PVT1-210ENST00000521122 RAVER2Q9HCJ3 691 aaKnown RBP10.57□□□□□ -0.72
PVT1-210ENST00000521122 A1CFQ9NQ94 594 aaKnown RBP10.57□□□□□ -0.72
PVT1-210ENST00000521122 RAB23Q9ULC3 237 aa10.57□□□□□ -0.72
PVT1-210ENST00000521122 CA14Q9ULX7 337 aa10.57□□□□□ -0.72
PVT1-210ENST00000521122 MRPL42Q9Y6G3 142 aaKnown RBP10.57□□□□□ -0.72
PVT1-210ENST00000521122 PATJQ8NI35 1801 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 RBM47A0AV96 593 aaKnown RBP10.56□□□□□ -0.72
PVT1-210ENST00000521122 NKRFO15226 690 aaKnown RBP eCLIP10.56□□□□□ -0.72
PVT1-210ENST00000521122 ZBED4O75132 1171 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 USP5P45974 858 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 DYNLL1P63167 89 aaKnown RBP10.56□□□□□ -0.72
PVT1-210ENST00000521122 UBE3AQ05086 875 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 LLGL2Q6P1M3 1020 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 PRPF38AQ8NAV1 312 aaKnown RBP10.56□□□□□ -0.72
PVT1-210ENST00000521122 PJA1Q8NG27 643 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 APBB2Q92870 758 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 XAGE2Q96GT9 111 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 ACAD9Q9H845 621 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 SPATA6Q9NWH7 488 aaPredicted RBP10.56□□□□□ -0.72
PVT1-210ENST00000521122 HDAC6Q9UBN7 1215 aa10.56□□□□□ -0.72
PVT1-210ENST00000521122 LAMA1P25391 3075 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 IL15P40933 162 aaPredicted RBP10.55□□□□□ -0.72
PVT1-210ENST00000521122 OAZ1P54368 228 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 COL28A1Q2UY09 1125 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 PDE12Q6L8Q7 609 aaKnown RBP10.55□□□□□ -0.72
PVT1-210ENST00000521122 XRRA1Q6P2D8 792 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 C7orf31Q8N865 590 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 KAT2BQ92831 832 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 CASP10Q92851 521 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 ACSF2Q96CM8 615 aaPredicted RBP10.55□□□□□ -0.72
PVT1-210ENST00000521122 PURBQ96QR8 312 aaKnown RBP10.55□□□□□ -0.72
PVT1-210ENST00000521122 SLC38A10Q9HBR0 1119 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 GOPCQ9HD26 462 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 HOMER2Q9NSB8 354 aa10.55□□□□□ -0.72
PVT1-210ENST00000521122 DBR1Q9UK59 544 aaKnown RBP10.55□□□□□ -0.72
PVT1-210ENST00000521122 CTDP1Q9Y5B0 961 aaPredicted RBP10.55□□□□□ -0.72
PVT1-210ENST00000521122 FSCN2O14926 492 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 THPOP40225 353 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 TTC3P53804 2025 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 LPAL2Q16609 132 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 KIAA1841Q6NSI8 718 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 PSAPL1Q6NUJ1 521 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 RUFY4Q6ZNE9 571 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 COL12A1Q99715 3063 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 SCNM1Q9BWG6 230 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 LSM14BQ9BX40 385 aaKnown RBP10.54□□□□□ -0.72
PVT1-210ENST00000521122 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 RAI2Q9Y5P3 530 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 MIA3Q5JRA6 1907 aa10.54□□□□□ -0.72
PVT1-210ENST00000521122 UBR5O95071 2799 aaPredicted RBP10.54□□□□□ -0.72
PVT1-210ENST00000521122 MAP3K13O43283 966 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 PPFIA3O75145 1194 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 LRRN2O75325 713 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 DGKIO75912 1065 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 TOP3BO95985 862 aaKnown RBP10.53□□□□□ -0.72
PVT1-210ENST00000521122 WEE2P0C1S8 567 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 ARID4AP29374 1257 aaPredicted RBP10.53□□□□□ -0.72
PVT1-210ENST00000521122 ERVFC1P60507 584 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 PPP2R5BQ15173 497 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 PROSER1Q86XN7 944 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 CERS3Q8IU89 383 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 CMTR2Q8IYT2 770 aaKnown RBP10.53□□□□□ -0.72
PVT1-210ENST00000521122 BCO2Q9BYV7 579 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 ARHGEF3Q9NR81 526 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 ACACAQ13085 2346 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 IL16Q14005 1332 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 DENND4AQ7Z401 1863 aa10.53□□□□□ -0.72
PVT1-210ENST00000521122 RAD21O60216 631 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 PRB1P04280 392 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 EEF2P13639 858 aaKnown RBP10.52□□□□□ -0.73
PVT1-210ENST00000521122 AKR1B1P15121 316 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 SRSF1Q07955 248 aaKnown RBP eCLIP10.52□□□□□ -0.73
PVT1-210ENST00000521122 ATAT1Q5SQI0 421 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 OTOP3Q7RTS5 596 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 LRRC47Q8N1G4 583 aaKnown RBP10.52□□□□□ -0.73
PVT1-210ENST00000521122 CELF5Q8N6W0 485 aaKnown RBP10.52□□□□□ -0.73
PVT1-210ENST00000521122 COPS5Q92905 334 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 NUP88Q99567 741 aaPredicted RBP10.52□□□□□ -0.73
PVT1-210ENST00000521122 FAM126AQ9BYI3 521 aaPredicted RBP10.52□□□□□ -0.73
PVT1-210ENST00000521122 OSBPL7Q9BZF2 842 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 FOXQ1Q9C009 403 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 ITPR3Q14573 2671 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 MYH7BA7E2Y1 1941 aa10.52□□□□□ -0.73
PVT1-210ENST00000521122 LCTP09848 1927 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 TICRRQ7Z2Z1 1910 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 C1QL1O75973 258 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 POLR3DP05423 398 aaPredicted RBP10.51□□□□□ -0.73
PVT1-210ENST00000521122 SRFP11831 508 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 PDE4BQ07343 736 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 ZNF252P-AS1Q0IIN9 211 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 AASDHQ4L235 1098 aaPredicted RBP10.51□□□□□ -0.73
PVT1-210ENST00000521122 SERINC5Q86VE9 423 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 GPR20Q99678 358 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 RNF146Q9NTX7 359 aa10.51□□□□□ -0.73
PVT1-210ENST00000521122 IGSF3O75054 1194 aa10.5□□□□□ -0.73
PVT1-210ENST00000521122 NTRK1P04629 796 aa10.5□□□□□ -0.73
PVT1-210ENST00000521122 EVX2Q03828 476 aa10.5□□□□□ -0.73
PVT1-210ENST00000521122 NONOQ15233 471 aaKnown RBP eCLIP10.5□□□□□ -0.73
PVT1-210ENST00000521122 PLPP4Q5VZY2 271 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms