RNA–Protein interactions for RNA: ENST00000520672.2

PCDHA2-202, Transcript of protocadherin alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PCDHA2, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2-202ENST00000520672 FAM228AQ86W67 206 aa15.27■□□□□ 0.04
PCDHA2-202ENST00000520672 GPIHBP1Q8IV16 184 aa15.27■□□□□ 0.04
PCDHA2-202ENST00000520672 C4orf32Q8N8J7 132 aa15.27■□□□□ 0.04
PCDHA2-202ENST00000520672 SH3GLB2Q9NR46 395 aa15.27■□□□□ 0.04
PCDHA2-202ENST00000520672 MAST2Q6P0Q8 1798 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 TMCO5BA8MYB1 307 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 ENC1O14682 589 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 MARCH6O60337 910 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 FAM163BP0C2L3 166 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 SLC1A4P43007 532 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 ATP1A2P50993 1020 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 IFT88Q13099 833 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 ZYXQ15942 572 aaKnown RBP15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 APTXQ7Z2E3 356 aaKnown RBP15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 LARGE2Q8N3Y3 721 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 LZTS2Q9BRK4 669 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 ZMYND12Q9H0C1 365 aa15.27■□□□□ 0.03
PCDHA2-202ENST00000520672 MFAP3LO75121 409 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 TDP2O95551 362 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 GYPCP04921 128 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 DPYDQ12882 1025 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 CCDC114Q96M63 670 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 SLF1Q9BQI6 1058 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 JMJD4Q9H9V9 463 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 GOPCQ9HD26 462 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 TRIM10Q9UDY6 481 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 ADAMTSL1Q8N6G6 1762 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 SLX4Q8IY92 1834 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 USH1GQ495M9 461 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 ZDHHC15Q96MV8 337 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 NAPGQ99747 312 aaPredicted RBP15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 HPCAL4Q9UM19 191 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 SUGT1Q9Y2Z0 365 aa15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 DDX60LQ5H9U9 1706 aaKnown RBP15.26■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L15C9J2P7 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L13C9JLJ4 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L11C9JVI0 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L18D6R9N7 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L22D6RA61 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L17D6RBQ6 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L19D6RCP7 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L20D6RJB6 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 RNF225M0QZC1 329 aaPredicted RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 M0R2N6 131 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ZNF543Q08ER8 600 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L24Q0WX57 530 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 NT5DC1Q5TFE4 455 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 CAPRIN2Q6IMN6 1127 aaKnown RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 USP17L6PQ6QN14 398 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 NEK8Q86SG6 692 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 PARP9Q8IXQ6 854 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ADD3Q9UEY8 706 aaKnown RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 TFR2Q9UP52 801 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 SYNRGQ9UMZ2 1314 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 OPLAHO14841 1288 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 SHOX2O60902 331 aaPredicted RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 PPP1R11O60927 126 aaPredicted RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ZBTB7AO95365 584 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 MIGA2Q7L4E1 593 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 RSRC1Q96IZ7 334 aaKnown RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 CAMKK2Q96RR4 588 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 CSRNP1Q96S65 589 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 VPS16Q9H269 839 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 GUCA1BQ9UMX6 200 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ZNF232Q9UNY5 417 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 GH2P01242 217 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ADCY7P51828 1080 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ERVK-24P63145 666 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ICA1Q05084 483 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 RBM26Q5T8P6 1007 aaKnown RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 STYK1Q6J9G0 422 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 PI4KBQ9UBF8 816 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 HDAC6Q9UBN7 1215 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 ATF5Q9Y2D1 282 aaPredicted RBP15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 GRIN2DO15399 1336 aa15.25■□□□□ 0.03
PCDHA2-202ENST00000520672 PYGBP11216 843 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 SMTNP53814 917 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 JAG1P78504 1218 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 MTA1Q13330 715 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 GNPTABQ3T906 1256 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 KRT25Q7Z3Z0 450 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 CCDC84Q86UT8 332 aaPredicted RBP15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 CDAN1Q8IWY9 1227 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 HPS3Q969F9 1004 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 CAPZA3Q96KX2 299 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 DISC1Q9NRI5 854 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 TPX2Q9ULW0 747 aaKnown RBP15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 MYO6Q9UM54 1294 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 TRIM49BA6NDI0 452 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 RASSF9O75901 435 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 OR52Z1P0C646 297 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 DPEP1P16444 411 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 MYO1EQ12965 1108 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 ASPRV1Q53RT3 343 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 HHATQ5VTY9 493 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 SPATA1Q5VX52 437 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 SLFN13Q68D06 897 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 PDXDC2PQ6P474 469 aa15.24■□□□□ 0.03
PCDHA2-202ENST00000520672 TLDC1Q6P9B6 456 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms