RNA–Protein interactions for RNA: ENST00000520561.1

CSMD1-208, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-208ENST00000520561 SEPT14Q6ZU15 432 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 EEPD1Q7L9B9 569 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 FBXO16Q8IX29 292 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-208ENST00000520561 CEP57L1Q8IYX8 460 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 PDILTQ8N807 584 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 GIMAP8Q8ND71 665 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-208ENST00000520561 EPSTI1Q96J88 318 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 MAML3Q96JK9 1138 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 ANP32EQ9BTT0 268 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 CCSER1Q9C0I3 900 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 CLSTN2Q9H4D0 955 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 VTA1Q9NP79 307 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 DISC1Q9NRI5 854 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-208ENST00000520561 USP25Q9UHP3 1055 aa10.07□□□□□ -0.8
CSMD1-208ENST00000520561 ZNFX1Q9P2E3 1918 aaKnown RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 SPATA31C2B4DYI2 1134 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 GPR25O00155 361 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 POLR2DO15514 142 aaKnown RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 RGS20O76081 388 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ZNF202O95125 648 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 KCNA2P16389 499 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 CYP2B6P20813 491 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 HOXD10P28358 340 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 CDC25AP30304 524 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 SFNP31947 248 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 CCT6AP40227 531 aaKnown RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 JAK3P52333 1124 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 SPIRE1Q08AE8 756 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ITGB3BPQ13352 177 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 NEDD9Q14511 834 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 TTLL4Q14679 1199 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 KARSQ15046 597 aaKnown RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ARHGEF6Q15052 776 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 RRAGBQ5VZM2 374 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 MAMDC4Q6UXC1 1216 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 USP49Q70CQ1 688 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 OTOP1Q7RTM1 612 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 MIER3Q7Z3K6 550 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 IQUBQ8NA54 791 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 CNNM3Q8NE01 707 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ENGASEQ8NFI3 743 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 RDM1Q8NG50 284 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 NPLOC4Q8TAT6 608 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 NEK9Q8TD19 979 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 DHX58Q96C10 678 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ERO1AQ96HE7 468 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 TIGD1Q96MW7 591 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 TINF2Q9BSI4 451 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ARHGAP39Q9C0H5 1083 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 NT5C3AQ9H0P0 336 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 TNMDQ9H2S6 317 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 UNC45AQ9H3U1 944 aa10.06□□□□□ -0.8
CSMD1-208ENST00000520561 JPH1Q9HDC5 661 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 HOOK1Q9UJC3 728 aaKnown RBP10.06□□□□□ -0.8
CSMD1-208ENST00000520561 ZSWIM8A7E2V4 1837 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 WDR64B1ANS9 1081 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 CTAGE5O15320 804 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 FKTNO75072 461 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 TGFB3P10600 412 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 UBA1P22314 1058 aaKnown RBP10.05□□□□□ -0.8
CSMD1-208ENST00000520561 SNW1Q13573 536 aaKnown RBP10.05□□□□□ -0.8
CSMD1-208ENST00000520561 EPHA7Q15375 998 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 OLFML2BQ68BL8 750 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 ZNF746Q6NUN9 644 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-208ENST00000520561 KANK3Q6NY19 840 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 KRBA2Q6ZNG9 492 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 SMAP1Q8IYB5 467 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-208ENST00000520561 SCFD2Q8WU76 684 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 USP6NLQ92738 828 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 TRIM47Q96LD4 638 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 SENP7Q9BQF6 1050 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 ABHD16BQ9H3Z7 469 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 CUEDC2Q9H467 287 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 MAGEF1Q9HAY2 307 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 TMEM63CQ9P1W3 806 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 SLC9A2Q9UBY0 812 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 STK17AQ9UEE5 414 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 ZHX1Q9UKY1 873 aaPredicted RBP10.05□□□□□ -0.8
CSMD1-208ENST00000520561 SAMM50Q9Y512 469 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 KIAA1217Q5T5P2 1943 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 CASP8AP2Q9UKL3 1982 aa10.05□□□□□ -0.8
CSMD1-208ENST00000520561 A0A087X0B3 334 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 POTEB3A0JP26 581 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 EML1O00423 815 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 DHX15O43143 795 aaKnown RBP10.04□□□□□ -0.8
CSMD1-208ENST00000520561 ACTN4O43707 911 aaKnown RBP10.04□□□□□ -0.8
CSMD1-208ENST00000520561 ATP9AO75110 1047 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 LETM1O95202 739 aaPredicted RBP10.04□□□□□ -0.8
CSMD1-208ENST00000520561 GGPS1O95749 300 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 GNRH1P01148 92 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 SLFN14P0C7P3 912 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 XRCC5P13010 732 aaKnown RBP10.04□□□□□ -0.8
CSMD1-208ENST00000520561 PLCG1P19174 1290 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 RPA1P27694 616 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 CTGFP29279 349 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 SP4Q02446 784 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 PRKCZQ05513 592 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 IRF5Q13568 498 aa10.04□□□□□ -0.8
CSMD1-208ENST00000520561 TMEM119Q4V9L6 283 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms