RNA–Protein interactions for RNA: ENST00000520140.5

VPS37A-206, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS37A, Length 2,102 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-206ENST00000520140 MTMR9Q96QG7 549 aa16.09■□□□□ 0.17
VPS37A-206ENST00000520140 TTC12Q9H892 705 aaPredicted RBP16.09■□□□□ 0.17
VPS37A-206ENST00000520140 RBM47A0AV96 593 aaKnown RBP16.08■□□□□ 0.16
VPS37A-206ENST00000520140 MAFGO15525 162 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 DYNC1LI2O43237 492 aaPredicted RBP16.08■□□□□ 0.16
VPS37A-206ENST00000520140 TGFB3P10600 412 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 TECP42680 631 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 KRT85P78386 507 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 PTPAQ15257 358 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 DUSP28Q4G0W2 176 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 DHX37Q8IY37 1157 aaKnown RBP16.08■□□□□ 0.16
VPS37A-206ENST00000520140 SDF4Q9BRK5 362 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 MLXIPQ9HAP2 919 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 POLR3EQ9NVU0 708 aa16.08■□□□□ 0.16
VPS37A-206ENST00000520140 VWA3AA6NCI4 1184 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 DHX15O43143 795 aaKnown RBP16.07■□□□□ 0.16
VPS37A-206ENST00000520140 BAG4O95429 457 aaKnown RBP16.07■□□□□ 0.16
VPS37A-206ENST00000520140 ATP2C1P98194 919 aaPredicted RBP16.07■□□□□ 0.16
VPS37A-206ENST00000520140 GRIN1Q05586 938 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 IL17AQ16552 155 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 HSDL1Q3SXM5 330 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 KCNV1Q6PIU1 500 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 TLK2Q86UE8 772 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 LINC00301Q8NCQ3 95 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 SLC5A5Q92911 643 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 RNF208Q9H0X6 261 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 CFAP45Q9UL16 551 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 PCDHA12Q9UN75 941 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 CEP131Q9UPN4 1083 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 POTEFA5A3E0 1075 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 POTEMA6NI47 508 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 PGK1P00558 417 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 NASPP49321 788 aaPredicted RBP16.07■□□□□ 0.16
VPS37A-206ENST00000520140 NEDD9Q14511 834 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 JPH1Q9HDC5 661 aaPredicted RBP16.07■□□□□ 0.16
VPS37A-206ENST00000520140 NRBP1Q9UHY1 535 aa16.07■□□□□ 0.16
VPS37A-206ENST00000520140 GNEQ9Y223 722 aaKnown RBP16.07■□□□□ 0.16
VPS37A-206ENST00000520140 PSMD10O75832 226 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 FARP2O94887 1054 aaPredicted RBP16.06■□□□□ 0.16
VPS37A-206ENST00000520140 CCL5P13501 91 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SLC39A14Q15043 492 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 CELF3Q5SZQ8 465 aaKnown RBP16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SLFN12Q8IYM2 578 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 OR6J1Q8NGC5 347 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SPATA32Q96LK8 384 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 FAM20AQ96MK3 541 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SPATA33Q96N06 139 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 CLIC6Q96NY7 704 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SENP7Q9BQF6 1050 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SAMM50Q9Y512 469 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SPTLC2O15270 562 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 CCNE2O96020 404 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 GH1P01241 217 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 RARBP10826 455 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 CDC25AP30304 524 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 BEX3Q00994 111 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 ARHGAP1Q07960 439 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 ORC2Q13416 577 aaPredicted RBP16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SPECC1Q5M775 1068 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 NCAPH2Q6IBW4 605 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 DEFB118Q96PH6 123 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 TEKT3Q9BXF9 490 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 UNC45AQ9H3U1 944 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 TBC1D22BQ9NU19 505 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 SLC9A2Q9UBY0 812 aa16.06■□□□□ 0.16
VPS37A-206ENST00000520140 DDX20Q9UHI6 824 aaKnown RBP16.06■□□□□ 0.16
VPS37A-206ENST00000520140 TBX3O15119 743 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 C6orf222P0C671 652 aaPredicted RBP16.05■□□□□ 0.16
VPS37A-206ENST00000520140 COL13A1Q5TAT6 717 aaPredicted RBP16.05■□□□□ 0.16
VPS37A-206ENST00000520140 METTL7BQ6UX53 244 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 DTHD1Q6ZMT9 781 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 TRMT1LQ7Z2T5 733 aaKnown RBP16.05■□□□□ 0.16
VPS37A-206ENST00000520140 AFG1LQ8WV93 481 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 ZNF333Q96JL9 665 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 XPNPEP3Q9NQH7 507 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 TCEAL9Q9UHQ7 104 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 VAV3Q9UKW4 847 aa16.05■□□□□ 0.16
VPS37A-206ENST00000520140 MYADML2A6NDP7 307 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 NOP56O00567 594 aaKnown RBP16.04■□□□□ 0.16
VPS37A-206ENST00000520140 ME1P48163 572 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 LEO1Q8WVC0 666 aaPredicted RBP16.04■□□□□ 0.16
VPS37A-206ENST00000520140 RIT2Q99578 217 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 KIAA0100Q14667 2235 aaKnown RBP16.04■□□□□ 0.16
VPS37A-206ENST00000520140 SYNRGQ9UMZ2 1314 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 EML1O00423 815 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 LAD1O00515 517 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 DUSP11O75319 330 aaKnown RBP16.04■□□□□ 0.16
VPS37A-206ENST00000520140 YEATS4O95619 227 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 BMP15O95972 392 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 ATL3Q6DD88 541 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 GIMAP8Q8ND71 665 aaPredicted RBP16.04■□□□□ 0.16
VPS37A-206ENST00000520140 AP5M1Q9H0R1 490 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 FRMPD3Q5JV73 1810 aa16.04■□□□□ 0.16
VPS37A-206ENST00000520140 NFASCO94856 1347 aa16.03■□□□□ 0.16
VPS37A-206ENST00000520140 ACTR2P61160 394 aa16.03■□□□□ 0.16
VPS37A-206ENST00000520140 SPIRE1Q08AE8 756 aa16.03■□□□□ 0.16
VPS37A-206ENST00000520140 LAMC2Q13753 1193 aa16.03■□□□□ 0.16
VPS37A-206ENST00000520140 TMEM266Q2M3C6 531 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms