RNA–Protein interactions for RNA: ENST00000519952.5

R3HCC1-205, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 5

Gene R3HCC1, Length 985 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-205ENST00000519952 RTP1P59025 263 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 HERVK_113P62684 666 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 CALCRLQ16602 461 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 TMEM266Q2M3C6 531 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 SPECC1Q5M775 1068 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 KANK3Q6NY19 840 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 FCHSD1Q86WN1 690 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 TIFAQ96CG3 184 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 ATG4CQ96DT6 458 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 RAB34Q9BZG1 259 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 PRDM12Q9H4Q4 367 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 DDX25Q9UHL0 483 aaKnown RBP13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 USP25Q9UHP3 1055 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 ADAMTS5Q9UNA0 930 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 RABGAP1Q9Y3P9 1069 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 ZNF536O15090 1300 aa13.84□□□□□ -0.19
R3HCC1-205ENST00000519952 LOC285556D6RIA3 1793 aa13.83□□□□□ -0.19
R3HCC1-205ENST00000519952 IGFBP4P22692 258 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 ARHGAP4P98171 946 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 NHLH1Q02575 133 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 GRIN1Q05586 938 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 TKFCQ3LXA3 575 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 MAP3K21Q5TCX8 1036 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 LHX8Q68G74 356 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 MOXD1Q6UVY6 613 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 CNNM3Q8NE01 707 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 AK8Q96MA6 479 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 TRERF1Q96PN7 1200 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 TSPYL2Q9H2G4 693 aaPredicted RBP13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 TMEM60Q9H2L4 133 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 CXXC1Q9P0U4 656 aaPredicted RBP13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 CCDC39Q9UFE4 941 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 GJD2Q9UKL4 321 aa13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 COL11A1P12107 1806 aaPredicted RBP13.83□□□□□ -0.2
R3HCC1-205ENST00000519952 CYP3A7-CYP3A51PA0A087WV96 503 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 POLR2DO15514 142 aaKnown RBP13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 PEX10O60683 326 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 CYP2B6P20813 491 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 CYP3A7P24462 503 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 SREBF1P36956 1147 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 UBA7P41226 1012 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 KCNQ1P51787 676 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 TFF2Q03403 129 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 CKAP2LQ8IYA6 745 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 ELOA2Q8IYF1 753 aaPredicted RBP13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 GPRC5AQ8NFJ5 357 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 RASSF8Q8NHQ8 419 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 PANK2Q9BZ23 570 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 MAF1Q9H063 256 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 MORF4L1Q9UBU8 362 aa13.82□□□□□ -0.2
R3HCC1-205ENST00000519952 PLXNB2O15031 1838 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 FSD2A1L4K1 749 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 OPLAHO14841 1288 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 ATP2A1O14983 1001 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 TDP2O95551 362 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 CYP3A4P08684 503 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 TAL1P17542 331 aaPredicted RBP13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 CCND3P30281 292 aaPredicted RBP13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 TECP42680 631 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 TXKP42681 527 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 CCNA1P78396 465 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 PLS1Q14651 629 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 IL17AQ16552 155 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 FAM110CQ1W6H9 321 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 SNRNP48Q6IEG0 339 aaKnown RBP13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 KRBA2Q6ZNG9 492 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 RBM43Q6ZSC3 357 aaKnown RBP13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 POTEDQ86YR6 584 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 SLFN12Q8IYM2 578 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 CEP57L1Q8IYX8 460 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 IQUBQ8NA54 791 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 TBC1D5Q92609 795 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 EPSTI1Q96J88 318 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 MTMR9Q96QG7 549 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 HOMER2Q9NSB8 354 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 RBPJLQ9UBG7 517 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 RLFQ13129 1914 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 ZDBF2Q9HCK1 2354 aa13.81□□□□□ -0.2
R3HCC1-205ENST00000519952 FRMPD3Q5JV73 1810 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 CHD7Q9P2D1 2997 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 COPB2P35606 906 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 STAT3P40763 770 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 FXR2P51116 673 aaKnown RBP eCLIP13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 HSD17B4P51659 736 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 CACNB2Q08289 660 aaPredicted RBP13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 ADGRE1Q14246 886 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 PDIA5Q14554 519 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 LONRF3Q496Y0 759 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 Q4G0T1 1027 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 RNF207Q6ZRF8 634 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 GAS2L3Q86XJ1 694 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 PDILTQ8N807 584 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 CLEC4DQ8WXI8 215 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 PAGR1Q9BTK6 254 aa13.8□□□□□ -0.2
R3HCC1-205ENST00000519952 TEX13BQ9BXU2 312 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms