RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 ATP9AO75110 1047 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 ATG7O95352 703 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
SPIDR-212ENST00000519661 NLRP5P59047 1200 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 FAAP100Q0VG06 881 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 ITGA7Q13683 1181 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 KRT25Q7Z3Z0 450 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 CYP2W1Q8TAV3 490 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 DPF3Q92784 378 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 FERMT2Q96AC1 680 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 ALG1Q9BT22 464 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 KATNAL1Q9BW62 490 aa13.14□□□□□ -0.31
SPIDR-212ENST00000519661 AGO4Q9HCK5 861 aaKnown RBP13.14□□□□□ -0.31
SPIDR-212ENST00000519661 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 JAK2O60674 1132 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 LGR5O75473 907 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 MMP1P03956 469 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 CLTBP09497 229 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 ITGB3BPQ13352 177 aaPredicted RBP13.13□□□□□ -0.31
SPIDR-212ENST00000519661 Q4G0T1 1027 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 JAKMIP3Q5VZ66 844 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 PPP4R3AQ6IN85 833 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 B3GNT9Q6UX72 402 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 TMX3Q96JJ7 454 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 SPATA33Q96N06 139 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 CTAGE1Q96RT6 745 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 RTEL1Q9NZ71 1219 aa13.13□□□□□ -0.31
SPIDR-212ENST00000519661 LAMA3Q16787 3333 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 LTBP2Q14767 1821 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 DCDC2CA8MYV0 355 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 GCFC2P16383 781 aaKnown RBP13.12□□□□□ -0.31
SPIDR-212ENST00000519661 ATN1P54259 1190 aaPredicted RBP13.12□□□□□ -0.31
SPIDR-212ENST00000519661 CUL4AQ13619 759 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 C7orf61Q8IZ16 206 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 FBXO18Q8NFZ0 1043 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 RASGRP4Q8TDF6 673 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 TBCKQ8TEA7 893 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 PGBD1Q96JS3 809 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 RIT2Q99578 217 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 MLXIPQ9HAP2 919 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 TBC1D22BQ9NU19 505 aa13.12□□□□□ -0.31
SPIDR-212ENST00000519661 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 TRIM43BA6NCK2 446 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 IPO5O00410 1097 aaKnown RBP13.11□□□□□ -0.31
SPIDR-212ENST00000519661 LGALS2P05162 132 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 SUPT20HL2P0C7V6 817 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 ARP10275 920 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 SLC26A2P50443 739 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 ADAM17P78536 824 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.31
SPIDR-212ENST00000519661 NBPF20Q3BBV1 942 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 CYFIP1Q7L576 1253 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 CCDC83Q8IWF9 413 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 SEPT1Q8WYJ6 367 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 SLC5A5Q92911 643 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 TRIM43Q96BQ3 446 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-212ENST00000519661 NAP1L4Q99733 375 aaKnown RBP13.11□□□□□ -0.31
SPIDR-212ENST00000519661 JPH1Q9HDC5 661 aaPredicted RBP13.11□□□□□ -0.31
SPIDR-212ENST00000519661 KCNMB3Q9NPA1 279 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 GTF2IRD1Q9UHL9 959 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 KCNJ14Q9UNX9 436 aa13.11□□□□□ -0.31
SPIDR-212ENST00000519661 H3BRB1 525 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 PITPNM1O00562 1244 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 TBX3O15119 743 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 B4GALT4O60513 344 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 ORC2Q13416 577 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-212ENST00000519661 KRT40Q6A162 431 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-212ENST00000519661 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 PLA2G4DQ86XP0 818 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 ETNPPLQ8TBG4 499 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 OXER1Q8TDS5 423 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 AFAP1L1Q8TED9 768 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 SNX21Q969T3 373 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-212ENST00000519661 FOXP1Q9H334 677 aaPredicted RBP13.1□□□□□ -0.31
SPIDR-212ENST00000519661 TUT1Q9H6E5 874 aaKnown RBP13.1□□□□□ -0.31
SPIDR-212ENST00000519661 GJB4Q9NTQ9 266 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 SLC9A2Q9UBY0 812 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 ATP11BQ9Y2G3 1177 aa13.1□□□□□ -0.31
SPIDR-212ENST00000519661 MYH7BA7E2Y1 1941 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 NOP56O00567 594 aaKnown RBP13.09□□□□□ -0.31
SPIDR-212ENST00000519661 TLR3O15455 904 aaKnown RBP13.09□□□□□ -0.31
SPIDR-212ENST00000519661 PSMD10O75832 226 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 CCNE2O96020 404 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 TIMP1P01033 207 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 MYL3P08590 195 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 ITGB8P26012 769 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 U2AF2P26368 475 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPIDR-212ENST00000519661 KRT2P35908 639 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 PSEN2P49810 448 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 PSMC6P62333 389 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 MFSD10Q14728 455 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 ABHD15Q6UXT9 468 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 SH3RF1Q7Z6J0 888 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 NEK8Q86SG6 692 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 RPAINQ86UA6 219 aa13.09□□□□□ -0.31
SPIDR-212ENST00000519661 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms