RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 ZNF215Q9UL58 517 aaPredicted RBP12.53□□□□□ -0.4
PVT1-208ENST00000519481 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
PVT1-208ENST00000519481 RSPH10B2B2RC85 870 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 RFXAPO00287 272 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 LGR5O75473 907 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 LGALS2P05162 132 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 RSPH10BP0C881 870 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 MRPS9P82933 396 aaKnown RBP12.52□□□□□ -0.41
PVT1-208ENST00000519481 ZNF200P98182 395 aaPredicted RBP12.52□□□□□ -0.41
PVT1-208ENST00000519481 TRIM71Q2Q1W2 868 aaKnown RBP12.52□□□□□ -0.41
PVT1-208ENST00000519481 SYNE3Q6ZMZ3 975 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 CYFIP1Q7L576 1253 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 SERINC5Q86VE9 423 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 GIMAP8Q8ND71 665 aaPredicted RBP12.52□□□□□ -0.41
PVT1-208ENST00000519481 GPKOWQ92917 476 aaPredicted RBP eCLIP12.52□□□□□ -0.41
PVT1-208ENST00000519481 CDHR1Q96JP9 859 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 RAD9AQ99638 391 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 MYL10Q9BUA6 226 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 MTCH2Q9Y6C9 303 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
PVT1-208ENST00000519481 PIK3CDO00329 1044 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 CAND2O75155 1236 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 GJB5O95377 273 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 AMHP03971 560 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 SMIM10L2AP0DMW4 78 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 SMIM10L2BP0DMW5 78 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 LIFRP42702 1097 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 DEFB103AP81534 67 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 GPNMBQ14956 572 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 RNF20Q5VTR2 975 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 PCNX4Q63HM2 1172 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 USP17L6PQ6QN14 398 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 ADAMTS19Q8TE59 1207 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
PVT1-208ENST00000519481 SENP7Q9BQF6 1050 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 ESYT1Q9BSJ8 1104 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 PSTPIP2Q9H939 334 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 EHMT1Q9H9B1 1298 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 ANO2Q9NQ90 1003 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 COG5Q9UP83 839 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 SLC12A7Q9Y666 1083 aa12.51□□□□□ -0.41
PVT1-208ENST00000519481 PRRC2BQ5JSZ5 2229 aaKnown RBP12.5□□□□□ -0.41
PVT1-208ENST00000519481 CHD7Q9P2D1 2997 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
PVT1-208ENST00000519481 SLC27A2O14975 620 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 SP4Q02446 784 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 UTP14CQ5TAP6 766 aaKnown RBP12.5□□□□□ -0.41
PVT1-208ENST00000519481 FAM117BQ6P1L5 589 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
PVT1-208ENST00000519481 DBF4BQ8NFT6 615 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 SEPT8Q92599 483 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 WNT8BQ93098 351 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 TGS1Q96RS0 853 aaKnown RBP12.5□□□□□ -0.41
PVT1-208ENST00000519481 GPR20Q99678 358 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 LSG1Q9H089 658 aaKnown RBP12.5□□□□□ -0.41
PVT1-208ENST00000519481 RNPEPQ9H4A4 650 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 INSL6Q9Y581 213 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 NCOR1O75376 2440 aa12.5□□□□□ -0.41
PVT1-208ENST00000519481 EPOPA6NHQ4 379 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 SPDYE3A6NKU9 549 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 MEIS2O14770 477 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 TREHO43280 583 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 PLEKHA8P1O95397 391 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 GRB10Q13322 594 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 CREB3L3Q68CJ9 461 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 TRAF7Q6Q0C0 670 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 TMCO2Q7Z6W1 182 aaPredicted RBP12.49□□□□□ -0.41
PVT1-208ENST00000519481 MYOCDQ8IZQ8 938 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 GPRASP2Q96D09 838 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 LMCD1Q9NZU5 365 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 VCANP13611 3396 aa12.49□□□□□ -0.41
PVT1-208ENST00000519481 LCHNA4D1U4 455 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 ARHGEF15O94989 841 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 CTSHP09668 335 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 RXRAP19793 462 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 HOXC8P31273 242 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 ERVK-21P61565 698 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 ARHGAP4P98171 946 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 SEMA3FQ13275 785 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 HIC1Q14526 733 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 MBTPS1Q14703 1052 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 PLEKHG4Q58EX7 1191 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 HEATR3Q7Z4Q2 680 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 RSPH3Q86UC2 560 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 CCDC82Q8N4S0 544 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 FANCBQ8NB91 859 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 SEPT1Q8WYJ6 367 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 HLA-CQ95604 372 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 BCAS3Q9H6U6 928 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 SETD4Q9NVD3 440 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 MTUS1Q9ULD2 1270 aa12.48□□□□□ -0.41
PVT1-208ENST00000519481 NRCAMQ92823 1304 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 MAFGO15525 162 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 ABCB7O75027 752 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 TFF2Q03403 129 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 MTMR1Q13613 665 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 NECTIN1Q15223 517 aa12.47□□□□□ -0.41
PVT1-208ENST00000519481 TCTN1Q2MV58 587 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms