RNA–Protein interactions for RNA: ENST00000519362.5

SPIDR-210, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,807 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-210	ENST00000519362	CHP1	Q99653	195 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	TSG101	Q99816	390 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	POLR3C	Q9BUI4	534 aa	Predicted RBP	13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	FGFBP2	Q9BYJ0	223 aa		13.75	□□□□□ -0.21
SPIDR-210	ENST00000519362	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362		A0A1W2PQJ5	194 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	EGFR	P00533	1210 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	CASQ1	P31415	396 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZNF76	P36508	570 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	KLK7	P49862	253 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	PSMC6	P62333	389 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	MAP3K9	P80192	1104 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	MAN2A1	Q16706	1144 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	ACRBP	Q8NEB7	543 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	IQCD	Q96DY2	449 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	WDR18	Q9BV38	432 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	IRX2	Q9BZI1	471 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	LZTFL1	Q9NQ48	299 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	AGPAT5	Q9NUQ2	364 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	FBXO28	Q9NVF7	368 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	DNM3	Q9UQ16	869 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	ATAD5	Q96QE3	1844 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	URI1	O94763	535 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	TRIM21	P19474	475 aa	Known RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	RPS12	P25398	132 aa	Known RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZBED6	P86452	979 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	FKBP3	Q00688	224 aa	Known RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	FKBP15	Q5T1M5	1219 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	OTOP1	Q7RTM1	612 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	CCDC84	Q86UT8	332 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	LDHD	Q86WU2	507 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	PDCL2	Q8N4E4	241 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	LRRN4CL	Q8ND94	238 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	SCFD1	Q8WVM8	642 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	NDST4	Q9H3R1	872 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	SIK3	Q9Y2K2	1263 aa		13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.74	□□□□□ -0.21
SPIDR-210	ENST00000519362	EML1	O00423	815 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	PSMD10	O75832	226 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	NDUFA10	O95299	355 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	ARHGAP25	P42331	645 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	TNFAIP1	Q13829	316 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	GIT2	Q14161	759 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZC3H3	Q8IXZ2	948 aa	Known RBP	13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	SLC5A5	Q92911	643 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	HSD17B14	Q9BPX1	270 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZNF341	Q9BYN7	854 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	MTFR1L	Q9H019	292 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	KCTD10	Q9H3F6	313 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	REXO2	Q9Y3B8	237 aa	Known RBP	13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362		V9GYY5	206 aa	Predicted RBP	13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	ZNF536	O15090	1300 aa		13.73	□□□□□ -0.21
SPIDR-210	ENST00000519362	MEIS1	O00470	390 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	KIF5C	O60282	957 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	KIF20A	O95235	890 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	ICAM1	P05362	532 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	POLD1	P28340	1107 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	INPP5B	P32019	993 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	CACNB1	Q02641	598 aa	Predicted RBP	13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	PABPC4	Q13310	644 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	PPP2R5C	Q13362	524 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	CEP55	Q53EZ4	464 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	CEP63	Q96MT8	703 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	EIF2AK1	Q9BQI3	630 aa	Known RBP	13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	EHMT1	Q9H9B1	1298 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	EMILIN3	Q9NT22	766 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	GINM1	Q9NU53	330 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	TBC1D7	Q9P0N9	293 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	SCAF8	Q9UPN6	1271 aa	Known RBP	13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	MRFAP1	Q9Y605	127 aa		13.72	□□□□□ -0.21
SPIDR-210	ENST00000519362	WDR46	O15213	610 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	KRT18	P05783	430 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	HNRNPH3	P31942	346 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	HSD17B4	P51659	736 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	MARS	P56192	900 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	CDK17	Q00537	523 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	RAD51AP2	Q09MP3	1159 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	ELF2	Q15723	593 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	TSR1	Q2NL82	804 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	LPAR1	Q92633	364 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	SLF1	Q9BQI6	1058 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	KIAA1683	Q9H0B3	1180 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	CGN	Q9P2M7	1197 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	COL4A3BP	Q9Y5P4	624 aa		13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	RBBP6	Q7Z6E9	1792 aa	Known RBP	13.71	□□□□□ -0.21
SPIDR-210	ENST00000519362	LTBP3	Q9NS15	1303 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	EYA4	O95677	639 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	ABL1	P00519	1130 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	GHRHR	Q02643	423 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	CYP4A11	Q02928	519 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	ERCC6L	Q2NKX8	1250 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	ARHGAP29	Q52LW3	1261 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	LRCH2	Q5VUJ6	765 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	PRPF38A	Q8NAV1	312 aa	Known RBP	13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	FEZ1	Q99689	392 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	REEP2	Q9BRK0	252 aa		13.71	□□□□□ -0.22
SPIDR-210	ENST00000519362	TUFT1	Q9NNX1	390 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms