RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 PTH1RQ03431 593 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 GRM4Q14833 912 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 IMMTQ16891 758 aaKnown RBP10.15□□□□□ -0.78
TRIM35-202ENST00000519219 PLEKHG4Q58EX7 1191 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 TMEM31Q5JXX7 168 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 FBXO22Q8NEZ5 403 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 EXOC6Q8TAG9 804 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 SP7Q8TDD2 431 aaPredicted RBP10.15□□□□□ -0.78
TRIM35-202ENST00000519219 KRT23Q9C075 422 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 MAF1Q9H063 256 aa10.15□□□□□ -0.78
TRIM35-202ENST00000519219 C5orf42Q9H799 3197 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.14□□□□□ -0.79
TRIM35-202ENST00000519219 C17orf102A2RUQ5 167 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 H3BQ06 376 aaPredicted RBP10.14□□□□□ -0.79
TRIM35-202ENST00000519219 PPFIA4O75335 1185 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 UPP2O95045 317 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 PARNO95453 639 aaKnown RBP10.14□□□□□ -0.79
TRIM35-202ENST00000519219 GSPT1P15170 499 aaKnown RBP10.14□□□□□ -0.79
TRIM35-202ENST00000519219 CCND2P30279 289 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 COL9A3Q14050 684 aaPredicted RBP10.14□□□□□ -0.79
TRIM35-202ENST00000519219 LEXMQ3ZCV2 418 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 EPC2Q52LR7 807 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 ATP6V0A1Q93050 837 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 RNPEPQ9H4A4 650 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 RIOX1Q9H6W3 641 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 SETD4Q9NVD3 440 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 LMCD1Q9NZU5 365 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 TTC3P53804 2025 aa10.14□□□□□ -0.79
TRIM35-202ENST00000519219 FRMPD4Q14CM0 1322 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 PI4K2BG5E9Z4 385 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 H3BRB1 525 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 GCOM1H8Y6P7 765 aaPredicted RBP10.13□□□□□ -0.79
TRIM35-202ENST00000519219 AMHP03971 560 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 CYP21A2P08686 494 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 POLR2MP0CAP2 368 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 HOXD11P31277 338 aaPredicted RBP10.13□□□□□ -0.79
TRIM35-202ENST00000519219 ANTXR2P58335 489 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 SP4Q02446 784 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 RUFY4Q6ZNE9 571 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 CYFIP1Q7L576 1253 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 FAM178BQ8IXR5 827 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 MRPL38Q96DV4 380 aaKnown RBP10.13□□□□□ -0.79
TRIM35-202ENST00000519219 GPR20Q99678 358 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 RWDD1Q9H446 243 aaPredicted RBP10.13□□□□□ -0.79
TRIM35-202ENST00000519219 TUT1Q9H6E5 874 aaKnown RBP10.13□□□□□ -0.79
TRIM35-202ENST00000519219 CNNM2Q9H8M5 875 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 MLXIPQ9HAP2 919 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 RTEL1Q9NZ71 1219 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 INSL6Q9Y581 213 aa10.13□□□□□ -0.79
TRIM35-202ENST00000519219 EMSYQ7Z589 1322 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 ZNF318Q5VUA4 2279 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 GPR37L1O60883 481 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 EFCAB14O75071 495 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 LINC00271P0C7V0 271 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 ADAM17P78536 824 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 TCEAL5Q5H9L2 206 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 UTP14CQ5TAP6 766 aaKnown RBP10.12□□□□□ -0.79
TRIM35-202ENST00000519219 PTCRAQ6ISU1 281 aaPredicted RBP10.12□□□□□ -0.79
TRIM35-202ENST00000519219 USP17L6PQ6QN14 398 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 LMBR1Q8WVP7 490 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 ZBTB10Q96DT7 871 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 INPP4AQ96PE3 977 aaPredicted RBP10.12□□□□□ -0.79
TRIM35-202ENST00000519219 MYL10Q9BUA6 226 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 CTNNA3Q9UI47 895 aa10.12□□□□□ -0.79
TRIM35-202ENST00000519219 PNMA6FA0A0J9YX94 578 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 GRXCR2A6NFK2 248 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 SPATA31C2B4DYI2 1134 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 H3BNC9 293 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 HIP1O00291 1037 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 IFIT3O14879 490 aaKnown RBP10.11□□□□□ -0.79
TRIM35-202ENST00000519219 CSPG5O95196 566 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 CHRNA1P02708 482 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 TGFB3P10600 412 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 ICAM3P32942 547 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 NT5C2P49902 561 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 ARHGAP4P98171 946 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 TROAPQ12815 778 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 GPM6BQ13491 265 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 KCNV1Q6PIU1 500 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 TMEM192Q8IY95 271 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 GJD3Q8N144 294 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 NEK9Q8TD19 979 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 SEPT8Q92599 483 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 TOP1MTQ969P6 601 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 YME1L1Q96TA2 773 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 MAP3K20Q9NYL2 800 aaKnown RBP10.11□□□□□ -0.79
TRIM35-202ENST00000519219 HCN4Q9Y3Q4 1203 aa10.11□□□□□ -0.79
TRIM35-202ENST00000519219 PLXNA4Q9HCM2 1894 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 TRIOO75962 3097 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 TECTAO75443 2155 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 E7EWF7 191 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 NOP56O00567 594 aaKnown RBP10.1□□□□□ -0.79
TRIM35-202ENST00000519219 ATP9AO75110 1047 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 GHRP10912 638 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 SSTR3P32745 418 aaPredicted RBP10.1□□□□□ -0.79
TRIM35-202ENST00000519219 GTF2F1P35269 517 aaKnown RBP eCLIP10.1□□□□□ -0.79
TRIM35-202ENST00000519219 LTBRP36941 435 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 DLX2Q07687 328 aaPredicted RBP10.1□□□□□ -0.79
TRIM35-202ENST00000519219 WTAPQ15007 396 aa10.1□□□□□ -0.79
TRIM35-202ENST00000519219 FAM26DQ5JW98 314 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms