RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 GPRASP2Q96D09 838 aa15.23■□□□□ 0.03
VEGFA-219ENST00000518824 GPR20Q99678 358 aa15.23■□□□□ 0.03
VEGFA-219ENST00000518824 MXRA8Q9BRK3 442 aa15.23■□□□□ 0.03
VEGFA-219ENST00000518824 HIPK3Q9H422 1215 aa15.23■□□□□ 0.03
VEGFA-219ENST00000518824 JADE2Q9NQC1 790 aa15.23■□□□□ 0.03
VEGFA-219ENST00000518824 HDAC6Q9UBN7 1215 aa15.23■□□□□ 0.03
VEGFA-219ENST00000518824 LGALS2P05162 132 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 SREBF1P36956 1147 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 NEK4P51957 841 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 AKAP17AQ02040 695 aaKnown RBP15.22■□□□□ 0.03
VEGFA-219ENST00000518824 FPGSQ05932 587 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 MFSD10Q14728 455 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 NPY5RQ15761 445 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 KIAA0753Q2KHM9 967 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 NFRKBQ6P4R8 1299 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 METTL7BQ6UX53 244 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 NLRX1Q86UT6 975 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 WNT8BQ93098 351 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 SCLYQ96I15 445 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 SLKQ9H2G2 1235 aaPredicted RBP15.22■□□□□ 0.03
VEGFA-219ENST00000518824 LAMA3Q16787 3333 aa15.22■□□□□ 0.03
VEGFA-219ENST00000518824 SZT2Q5T011 3432 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 FAM86B1E9PN63 330 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 CPLX1O14810 134 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 PPFIA4O75335 1185 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 FOSP01100 380 aaPredicted RBP15.21■□□□□ 0.03
VEGFA-219ENST00000518824 FAM86B2P0C5J1 330 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 ARHGAP4P98171 946 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 AP3B2Q13367 1082 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 MTMR1Q13613 665 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 NEDD9Q14511 834 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 UTP14CQ5TAP6 766 aaKnown RBP15.21■□□□□ 0.03
VEGFA-219ENST00000518824 DHX38Q92620 1227 aaKnown RBP15.21■□□□□ 0.03
VEGFA-219ENST00000518824 SENP7Q9BQF6 1050 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.21■□□□□ 0.032e-12■■■□□ 14.6
VEGFA-219ENST00000518824 C6orf50Q9HD87 102 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 KCNH7Q9NS40 1196 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 KCNJ14Q9UNX9 436 aa15.21■□□□□ 0.03
VEGFA-219ENST00000518824 GSTTP1A0A1W2PQM5 241 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 DEXIO95424 95 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 SLC34A2O95436 690 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 ITGB3BPQ13352 177 aaPredicted RBP15.2■□□□□ 0.02
VEGFA-219ENST00000518824 PTGISQ16647 500 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 LRIT3Q3SXY7 679 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 SESTD1Q86VW0 696 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 REXO1Q8N1G1 1221 aaKnown RBP15.2■□□□□ 0.02
VEGFA-219ENST00000518824 GTF2IRD1Q9UHL9 959 aa15.2■□□□□ 0.02
VEGFA-219ENST00000518824 IGLV3-22A0A075B6J6 115 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 H3BRB1 525 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 M0R2N6 131 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 MEIS1O00470 390 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 NOP56O00567 594 aaKnown RBP15.19■□□□□ 0.02
VEGFA-219ENST00000518824 FDPSP14324 419 aaKnown RBP15.19■□□□□ 0.02
VEGFA-219ENST00000518824 NLRP5P59047 1200 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 PTPN11Q06124 597 aaPredicted RBP15.19■□□□□ 0.02
VEGFA-219ENST00000518824 CEP55Q53EZ4 464 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 TMEM240Q5SV17 173 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 PCYT2Q99447 389 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 SEZ6LQ9BYH1 1024 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 TUT1Q9H6E5 874 aaKnown RBP15.19■□□□□ 0.02
VEGFA-219ENST00000518824 EHMT1Q9H9B1 1298 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 AGO4Q9HCK5 861 aaKnown RBP15.19■□□□□ 0.02
VEGFA-219ENST00000518824 TET1Q8NFU7 2136 aa15.19■□□□□ 0.02
VEGFA-219ENST00000518824 TANC1Q9C0D5 1861 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 JAK2O60674 1132 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 CYP3A4P08684 503 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 GNA11P29992 359 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 TCF7P36402 384 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-219ENST00000518824 FAM109BQ6ICB4 259 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-219ENST00000518824 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 Q7L0L9 218 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 PLA2G4DQ86XP0 818 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 C7orf31Q8N865 590 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 CCDC12Q8WUD4 166 aaPredicted RBP15.18■□□□□ 0.02
VEGFA-219ENST00000518824 GTF3C6Q969F1 213 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 GLT8D2Q9H1C3 349 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 RNPEPQ9H4A4 650 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 SH3GLB2Q9NR46 395 aa15.18■□□□□ 0.02
VEGFA-219ENST00000518824 DDX39AO00148 427 aaKnown RBP15.17■□□□□ 0.02
VEGFA-219ENST00000518824 CCNE2O96020 404 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 SUPT20HL2P0C7V6 817 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 SMIM10L2AP0DMW4 78 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 SMIM10L2BP0DMW5 78 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 ZNF76P36508 570 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 FOSBP53539 338 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 PPIGQ13427 754 aaKnown RBP eCLIP15.17■□□□□ 0.021e-7■■□□□ 12.8
VEGFA-219ENST00000518824 GPNMBQ14956 572 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 ANKRD1Q15327 319 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 TRIM71Q2Q1W2 868 aaKnown RBP15.17■□□□□ 0.02
VEGFA-219ENST00000518824 TMEM199Q8N511 208 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 NSUN7Q8NE18 718 aaKnown RBP15.17■□□□□ 0.02
VEGFA-219ENST00000518824 CCDC148Q8NFR7 591 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 OXER1Q8TDS5 423 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 GJA10Q969M2 543 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 LENG9Q96B70 501 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 CDHR1Q96JP9 859 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 RNPC3Q96LT9 517 aaKnown RBP15.17■□□□□ 0.02
VEGFA-219ENST00000518824 KATNAL1Q9BW62 490 aa15.17■□□□□ 0.02
VEGFA-219ENST00000518824 C22orf23Q9BZE7 217 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms