RNA–Protein interactions for RNA: ENST00000518780.1

CLN8-203, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-203ENST00000518780 LRCH2Q5VUJ6 765 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 ZNF746Q6NUN9 644 aaPredicted RBP10.7□□□□□ -0.7
CLN8-203ENST00000518780 FAM173BQ6P4H8 233 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 METTL7BQ6UX53 244 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 DHX37Q8IY37 1157 aaKnown RBP10.7□□□□□ -0.7
CLN8-203ENST00000518780 SMAP1Q8IYB5 467 aaPredicted RBP10.7□□□□□ -0.7
CLN8-203ENST00000518780 KCTD17Q8N5Z5 321 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 HAS1Q92839 578 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 TNPO1Q92973 898 aaKnown RBP10.7□□□□□ -0.7
CLN8-203ENST00000518780 ARMC5Q96C12 935 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 AK8Q96MA6 479 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 TEKT3Q9BXF9 490 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 MLXIPQ9HAP2 919 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 SPC25Q9HBM1 224 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 TFIP11Q9UBB9 837 aaKnown RBP10.7□□□□□ -0.7
CLN8-203ENST00000518780 SRPRBQ9Y5M8 271 aaKnown RBP10.7□□□□□ -0.7
CLN8-203ENST00000518780 PLXNB2O15031 1838 aa10.7□□□□□ -0.7
CLN8-203ENST00000518780 CASP8AP2Q9UKL3 1982 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 WNT7AO00755 349 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 SPTLC2O15270 562 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 KPNA6O60684 536 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 ATP9AO75110 1047 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 RARBP10826 455 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 SMPD1P17405 629 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 UBA1P22314 1058 aaKnown RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 LONP1P36776 959 aaKnown RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 ADCYAP1R1P41586 468 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 JAK3P52333 1124 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 PPP2R5CQ13362 524 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 PRAMEF19Q5SWL8 479 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 B3GNT9Q6UX72 402 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 KRI1Q8N9T8 703 aaKnown RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 ZNF579Q8NAF0 562 aaKnown RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 ERMNQ8TAM6 284 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 SPATA32Q96LK8 384 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 GBP4Q96PP9 640 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 AP5M1Q9H0R1 490 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 TMEM60Q9H2L4 133 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 TTC12Q9H892 705 aaPredicted RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 JPH1Q9HDC5 661 aaPredicted RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 PDGFCQ9NRA1 345 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 SLC9A2Q9UBY0 812 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 DDX20Q9UHI6 824 aaKnown RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 GNEQ9Y223 722 aaKnown RBP10.69□□□□□ -0.7
CLN8-203ENST00000518780 CLIC4Q9Y696 253 aa10.69□□□□□ -0.7
CLN8-203ENST00000518780 PCNTO95613 3336 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 ELP1O95163 1332 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 WDR64B1ANS9 1081 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 DKC1O60832 514 aaKnown RBP eCLIP10.68□□□□□ -0.7
CLN8-203ENST00000518780 PPFIA4O75335 1185 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 FARP2O94887 1054 aaPredicted RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 ARIH2O95376 493 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 GGPS1O95749 300 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 NCLP19338 710 aaKnown RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 MUTP22033 750 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 CNGA1P29973 690 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 TXKP42681 527 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 CPT1AP50416 773 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 GJA9P57773 515 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 SP2Q02086 613 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 ITGB3BPQ13352 177 aaPredicted RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 NBR1Q14596 966 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 LY6KQ17RY6 165 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 IGSF22Q8N9C0 903 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 TRPV1Q8NER1 839 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 PPTC7Q8NI37 304 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 NEK9Q8TD19 979 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 LEO1Q8WVC0 666 aaPredicted RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 SEPT1Q8WYJ6 367 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 ZNF333Q96JL9 665 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 ZFP91Q96JP5 570 aaPredicted RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 UPF3AQ9H1J1 476 aaKnown RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 DDX49Q9Y6V7 483 aaKnown RBP10.68□□□□□ -0.7
CLN8-203ENST00000518780 MGAMO43451 1857 aa10.68□□□□□ -0.7
CLN8-203ENST00000518780 A6NJR5 290 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 NOP56O00567 594 aaKnown RBP10.67□□□□□ -0.7
CLN8-203ENST00000518780 ZEB2O60315 1214 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 CUTAO60888 179 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 ATG7O95352 703 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 HOXD8P13378 290 aaPredicted RBP10.67□□□□□ -0.7
CLN8-203ENST00000518780 CST5P28325 142 aaPredicted RBP10.67□□□□□ -0.7
CLN8-203ENST00000518780 SLC26A2P50443 739 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 CEBPZQ03701 1054 aaKnown RBP10.67□□□□□ -0.7
CLN8-203ENST00000518780 ARHGAP1Q07960 439 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 SPIRE1Q08AE8 756 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 TRIM32Q13049 653 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 EPHA7Q15375 998 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 HAUS3Q68CZ6 603 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 ADALQ6DHV7 355 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 MIS18BP1Q6P0N0 1132 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 CYFIP1Q7L576 1253 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 ARRDC4Q8NCT1 418 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 OR6J1Q8NGC5 347 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 SH3TC2Q8TF17 1288 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 SPATA33Q96N06 139 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.67□□□□□ -0.7
CLN8-203ENST00000518780 PAK6Q9NQU5 681 aaPredicted RBP10.67□□□□□ -0.7
CLN8-203ENST00000518780 VAV3Q9UKW4 847 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 PCDHA10Q9Y5I2 948 aa10.67□□□□□ -0.7
CLN8-203ENST00000518780 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms