RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 PTCH2Q9Y6C5 1203 aa7.86□□□□□ -1.15
CCDC6-203ENST00000518638 MAPK8IP3Q9UPT6 1336 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.85□□□□□ -1.15
CCDC6-203ENST00000518638 IRS4O14654 1257 aaPredicted RBP7.85□□□□□ -1.15
CCDC6-203ENST00000518638 RECKO95980 971 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 TFE3P19532 575 aaPredicted RBP7.85□□□□□ -1.15
CCDC6-203ENST00000518638 MESP2Q0VG99 397 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 NFE2L2Q16236 605 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 ERMP1Q7Z2K6 904 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 ANKRD18AQ8IVF6 992 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 MRRFQ96E11 262 aaKnown RBP7.85□□□□□ -1.15
CCDC6-203ENST00000518638 FANCD2OSQ96PS1 177 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 CDC5LQ99459 802 aaKnown RBP7.85□□□□□ -1.15
CCDC6-203ENST00000518638 COA1Q9GZY4 146 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 PRO3102Q9H379 93 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 ZCCHC17Q9NP64 241 aaKnown RBP7.85□□□□□ -1.15
CCDC6-203ENST00000518638 FAM105AQ9NUU6 356 aa7.85□□□□□ -1.15
CCDC6-203ENST00000518638 BRCA2P51587 3418 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 HTTP42858 3142 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 SASH1O94885 1247 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 RNASE1P07998 156 aaKnown RBP7.84□□□□□ -1.15
CCDC6-203ENST00000518638 ASPAP45381 313 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 ERVK-24P63145 666 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 PTPN11Q06124 597 aaPredicted RBP7.84□□□□□ -1.15
CCDC6-203ENST00000518638 LMOD3Q0VAK6 560 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 PWP1Q13610 501 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 CILP2Q8IUL8 1156 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 ZBTB38Q8NAP3 1195 aaPredicted RBP7.84□□□□□ -1.15
CCDC6-203ENST00000518638 ISCA1Q9BUE6 129 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 DEFB129Q9H1M3 183 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 SEMA6CQ9H3T2 930 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 ACSS3Q9H6R3 686 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 DISC1Q9NRI5 854 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 MBNL3Q9NUK0 354 aaKnown RBP7.84□□□□□ -1.15
CCDC6-203ENST00000518638 KIAA1522Q9P206 1035 aaPredicted RBP7.84□□□□□ -1.15
CCDC6-203ENST00000518638 PCDHA4Q9UN74 947 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 SCAF8Q9UPN6 1271 aaKnown RBP7.84□□□□□ -1.15
CCDC6-203ENST00000518638 TLR6Q9Y2C9 796 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 STXBP5LQ9Y2K9 1186 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 PCDHB5Q9Y5E4 795 aa7.84□□□□□ -1.15
CCDC6-203ENST00000518638 ZNF804BA4D1E1 1349 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 COL4A1P02462 1669 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 B8ZZF3 427 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 PDE8AO60658 829 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 GJB1P08034 283 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 HOXB7P09629 217 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 HOXD10P28358 340 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 GTF2A2P52657 109 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 BNIP3Q12983 259 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 TNFAIP1Q13829 316 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 DLGAP5Q15398 846 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 PROSER3Q2NL68 480 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 HS2ST1Q7LGA3 356 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 RHOVQ96L33 236 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 TMEM74Q96NL1 305 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 MIR1-1HGQ9H1L0 117 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 CEP290O15078 2479 aa7.83□□□□□ -1.16
CCDC6-203ENST00000518638 SSC5DA1L4H1 1573 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 LRRC10BA6NIK2 292 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 TLR2O60603 784 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 ANXA1P04083 346 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 RAP1GAPP47736 663 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 GJA8P48165 433 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 CENPFP49454 3210 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 UBXN2AP68543 259 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 LACTBP83111 547 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-203ENST00000518638 SEPT6Q14141 434 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 TTLL5Q6EMB2 1281 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 RELL1Q8IUW5 271 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 RNF214Q8ND24 703 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 LRRN4CLQ8ND94 238 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 ZSCAN18Q8TBC5 510 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-203ENST00000518638 SH3TC2Q8TF17 1288 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 OPTNQ96CV9 577 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 ZBED3Q96IU2 234 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-203ENST00000518638 CLMNQ96JQ2 1002 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 PIDD1Q9HB75 910 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 METTL5Q9NRN9 209 aaKnown RBP7.82□□□□□ -1.16
CCDC6-203ENST00000518638 HYPKQ9NX55 129 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 DBF4Q9UBU7 674 aaPredicted RBP7.82□□□□□ -1.16
CCDC6-203ENST00000518638 ADAMTS6Q9UKP5 1117 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 OTOFQ9HC10 1997 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 SZT2Q5T011 3432 aa7.82□□□□□ -1.16
CCDC6-203ENST00000518638 F6X3S4 739 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 CD8BP10966 210 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 GBP2P32456 591 aaPredicted RBP7.81□□□□□ -1.16
CCDC6-203ENST00000518638 LMNB2Q03252 620 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 RING1Q06587 406 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 TTLL4Q14679 1199 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 OGFOD3Q6PK18 319 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.81□□□□□ -1.16
CCDC6-203ENST00000518638 UBE2Q1Q7Z7E8 422 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 CCDC84Q86UT8 332 aaPredicted RBP7.81□□□□□ -1.16
CCDC6-203ENST00000518638 KIAA0825Q8IV33 1275 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 CCDC191Q8NCU4 936 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 RAET1EQ8TD07 263 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 SHISA4Q96DD7 197 aa7.81□□□□□ -1.16
CCDC6-203ENST00000518638 PTPN18Q99952 460 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms