RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 BRMS1Q9HCU9 246 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 GRIN2DO15399 1336 aa25.03■■□□□ 1.6
VEGFA-217ENST00000518538 MYH7BA7E2Y1 1941 aa25.02■■□□□ 1.6
VEGFA-217ENST00000518538 IGLV3-22A0A075B6J6 115 aa25.02■■□□□ 1.6
VEGFA-217ENST00000518538 ARP10275 920 aa25.02■■□□□ 1.6
VEGFA-217ENST00000518538 SETQ01105 290 aaPredicted RBP25.02■■□□□ 1.6
VEGFA-217ENST00000518538 NONOQ15233 471 aaKnown RBP eCLIP25.02■■□□□ 1.69e-8■■■■□ 26.1
VEGFA-217ENST00000518538 PLA2G4DQ86XP0 818 aa25.02■■□□□ 1.6
VEGFA-217ENST00000518538 AGO4Q9HCK5 861 aaKnown RBP25.02■■□□□ 1.6
VEGFA-217ENST00000518538 PKD2L1Q9P0L9 805 aa25.02■■□□□ 1.6
VEGFA-217ENST00000518538 DCDC2CA8MYV0 355 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 EDIL3O43854 480 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 MMP1P03956 469 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 KRT2P35908 639 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 OXER1Q8TDS5 423 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 GPR20Q99678 358 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 ZMYND8Q9ULU4 1186 aaPredicted RBP25.01■■□□□ 1.59
VEGFA-217ENST00000518538 NFASCO94856 1347 aa25.01■■□□□ 1.59
VEGFA-217ENST00000518538 SCN10AQ9Y5Y9 1956 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 CCDC194A0A1B0GVG4 234 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 F2P00734 622 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 FOSBP53539 338 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 KRT40Q6A162 431 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 FAM126BQ8IXS8 530 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 FAM184AQ8NB25 1140 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 KAT2BQ92831 832 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 SDF4Q9BRK5 362 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 KATNAL1Q9BW62 490 aa25■■□□□ 1.59
VEGFA-217ENST00000518538 CLTBP09497 229 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 ZNF286BP0CG31 522 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 SP4Q02446 784 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 NBPF20Q3BBV1 942 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 PRR16Q569H4 304 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 NFRKBQ6P4R8 1299 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 C8orf76Q96K31 380 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 JPH1Q9HDC5 661 aaPredicted RBP24.99■■□□□ 1.59
VEGFA-217ENST00000518538 PDLIM7Q9NR12 457 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 PRKAG2Q9UGJ0 569 aa24.99■■□□□ 1.59
VEGFA-217ENST00000518538 DOCK5Q9H7D0 1870 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 TLR3O15455 904 aaKnown RBP24.98■■□□□ 1.59
VEGFA-217ENST00000518538 SYN1P17600 705 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 FAAP100Q0VG06 881 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 ITGB3BPQ13352 177 aaPredicted RBP24.98■■□□□ 1.59
VEGFA-217ENST00000518538 INF2Q27J81 1249 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 MOXD1Q6UVY6 613 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 TNFRSF25Q93038 417 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 LENG9Q96B70 501 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 C16orf70Q9BSU1 422 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 SLC9A2Q9UBY0 812 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 TELO2Q9Y4R8 837 aa24.98■■□□□ 1.59
VEGFA-217ENST00000518538 LGALS2P05162 132 aa24.97■■□□□ 1.59
VEGFA-217ENST00000518538 PTPN11Q06124 597 aaPredicted RBP24.97■■□□□ 1.59
VEGFA-217ENST00000518538 NR5A1Q13285 461 aa24.97■■□□□ 1.59
VEGFA-217ENST00000518538 PIK3AP1Q6ZUJ8 805 aa24.97■■□□□ 1.59
VEGFA-217ENST00000518538 DIS3L2Q8IYB7 885 aaKnown RBP24.97■■□□□ 1.59
VEGFA-217ENST00000518538 SEPT1Q8WYJ6 367 aa24.97■■□□□ 1.59
VEGFA-217ENST00000518538 ZNF577Q9BSK1 485 aa24.97■■□□□ 1.59
VEGFA-217ENST00000518538 PRDM5Q9NQX1 630 aaPredicted RBP24.97■■□□□ 1.59
VEGFA-217ENST00000518538 DNAH12Q6ZR08 3092 aa24.97■■□□□ 1.59
VEGFA-217ENST00000518538 CYP3A7-CYP3A51PA0A087WV96 503 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 HAS3O00219 553 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 IPO5O00410 1097 aaKnown RBP24.96■■□□□ 1.59
VEGFA-217ENST00000518538 CD4P01730 458 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 CYP3A7P24462 503 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 PSEN2P49810 448 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 MFSD10Q14728 455 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 SH3RF1Q7Z6J0 888 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 NEK8Q86SG6 692 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 KIF3AQ9Y496 699 aa24.96■■□□□ 1.59
VEGFA-217ENST00000518538 BTBD18B2RXH4 712 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 B4GALT4O60513 344 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 TDP2O95551 362 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 TCF7P36402 384 aaPredicted RBP24.95■■□□□ 1.58
VEGFA-217ENST00000518538 CHMP4BP1P59074 171 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 GUCY1B3Q02153 619 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 SAFBQ15424 915 aaKnown RBP eCLIP24.95■■□□□ 1.58
VEGFA-217ENST00000518538 KIAA0753Q2KHM9 967 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 Q4G0T1 1027 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 FAM47CQ5HY64 1035 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 SESTD1Q86VW0 696 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 FBXO18Q8NFZ0 1043 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 MBOAT7Q96N66 472 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 TMEM39AQ9NV64 488 aa24.95■■□□□ 1.58
VEGFA-217ENST00000518538 GSTTP1A0A1W2PQM5 241 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 TRIM43BA6NCK2 446 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 H3BRB1 525 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 KIAA0355O15063 1070 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 DHX15O43143 795 aaKnown RBP24.94■■□□□ 1.58
VEGFA-217ENST00000518538 LETM2Q2VYF4 491 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 EARS2Q5JPH6 523 aaKnown RBP24.94■■□□□ 1.58
VEGFA-217ENST00000518538 TRIM43Q96BQ3 446 aaPredicted RBP24.94■■□□□ 1.58
VEGFA-217ENST00000518538 TUT1Q9H6E5 874 aaKnown RBP24.94■■□□□ 1.58
VEGFA-217ENST00000518538 TBC1D22BQ9NU19 505 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 TBX21Q9UL17 535 aa24.94■■□□□ 1.58
VEGFA-217ENST00000518538 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.94■■□□□ 1.58
VEGFA-217ENST00000518538 GCFC2P16383 781 aaKnown RBP24.93■■□□□ 1.58
VEGFA-217ENST00000518538 ACTR2P61160 394 aa24.93■■□□□ 1.58
VEGFA-217ENST00000518538 UTP14CQ5TAP6 766 aaKnown RBP24.93■■□□□ 1.58
VEGFA-217ENST00000518538 PPP1R13LQ8WUF5 828 aa24.93■■□□□ 1.58
VEGFA-217ENST00000518538 NAP1L4Q99733 375 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms