RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 HIC1Q14526 733 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 QRICH1Q2TAL8 776 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 IL17RAQ96F46 866 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 C16orf70Q9BSU1 422 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 TUT1Q9H6E5 874 aaKnown RBP13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 KAT14Q9H8E8 782 aa13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 ZBTB47Q9UFB7 747 aaPredicted RBP13.35□□□□□ -0.27
TRAPPC9-203ENST00000517667 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 MBTPS2O43462 519 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 SMIM10L2AP0DMW4 78 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 SMIM10L2BP0DMW5 78 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 PTPN5P54829 565 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 SMAD4Q13485 552 aaKnown RBP13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 TBC1D10CQ8IV04 446 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 SAMD3Q8N6K7 520 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 PDCD2LQ9BRP1 358 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 AMNQ9BXJ7 453 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 MLXIPQ9HAP2 919 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 MUTYHQ9UIF7 546 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 SALL3Q9BXA9 1300 aa13.34□□□□□ -0.27
TRAPPC9-203ENST00000517667 A0A0D9SFI3 127 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 TREHO43280 583 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 RGS20O76081 388 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 CTSHP09668 335 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 PARP1P09874 1014 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 MYCLP12524 364 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 UBA1P22314 1058 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 BMPR1AP36894 532 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 STOX1Q6ZVD7 989 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 BMP8AQ7Z5Y6 402 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 VSIG10LQ86VR7 867 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 RNF135Q8IUD6 432 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 EDAQ92838 391 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 PPP2R3CQ969Q6 453 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 FAM227BQ96M60 508 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 ZKSCAN3Q9BRR0 538 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 USP26Q9BXU7 913 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 JMJD4Q9H9V9 463 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 NEDD4P46934 1319 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 ADGRA3Q8IWK6 1321 aa13.33□□□□□ -0.28
TRAPPC9-203ENST00000517667 KMT2EQ8IZD2 1858 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 STXBP3O00186 592 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 NOP56O00567 594 aaKnown RBP13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 ST18O60284 1047 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 LGALS2P05162 132 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 CCND2P30279 289 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 HYAL1Q12794 435 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 PGM5Q15124 567 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 CLUL1Q15846 466 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 GNPTABQ3T906 1256 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 ANKS1AQ92625 1134 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 PLVAPQ9BX97 442 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 CD207Q9UJ71 328 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 TECTAO75443 2155 aa13.32□□□□□ -0.28
TRAPPC9-203ENST00000517667 KAT6AQ92794 2004 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 TRIM6-TRIM34B2RNG4 842 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 ZNF213O14771 459 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 OPLAHO14841 1288 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 GRM6O15303 877 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 SORBS3O60504 671 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 TBX10O75333 385 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 MMP1P03956 469 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 SP2Q02086 613 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 DLX2Q07687 328 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 TRAF1Q13077 416 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 FAM26DQ5JW98 314 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 ZNF589Q86UQ0 364 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 SUGP1Q8IWZ8 645 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 CLP1Q92989 425 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 ZSCAN10Q96SZ4 725 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 RC3H2Q9HBD1 1191 aaKnown RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 VAT1LQ9HCJ6 419 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 ZNF215Q9UL58 517 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 MYO7AQ13402 2215 aa13.31□□□□□ -0.28
TRAPPC9-203ENST00000517667 KIAA1671Q9BY89 1806 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 DOCK5Q9H7D0 1870 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 KDM4AO75164 1064 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 STAM2O75886 525 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 LINC00271P0C7V0 271 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 NDUFV1P49821 464 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 NMIQ13287 307 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 NEDD9Q14511 834 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 TRIM67Q6ZTA4 783 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 ENAHQ8N8S7 591 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 PRSS33Q8NF86 280 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 PBXIP1Q96AQ6 731 aa13.3□□□□□ -0.28
TRAPPC9-203ENST00000517667 TMEM221A6NGB7 291 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 M0R296 226 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 ZBTB5O15062 677 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 EYA4O95677 639 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 PDE1AP54750 535 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 ADAM15Q13444 863 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 BTG3Q14201 252 aaPredicted RBP13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 NAALADL2Q58DX5 795 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 TAF2Q6P1X5 1199 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 METTL7BQ6UX53 244 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 P2RX5Q93086 422 aa13.29□□□□□ -0.28
TRAPPC9-203ENST00000517667 OSBPL7Q9BZF2 842 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms