RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 C16orf59Q7L2K0 433 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 NECAB2Q7Z6G3 386 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 OSTM1Q86WC4 334 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 TCEAL8Q8IYN2 117 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 PLEKHO2Q8TD55 490 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 ASB11Q8WXH4 323 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 MTMR8Q96EF0 704 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 CHAMP1Q96JM3 812 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 YIPF4Q9BSR8 244 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 AASDHPPTQ9NRN7 309 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 VAV3Q9UKW4 847 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 RWDD3Q9Y3V2 267 aa7.24□□□□□ -1.25
CTNNA1-202ENST00000517533 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 DVL2O14641 736 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 GABRDO14764 452 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 NKRFO15226 690 aaKnown RBP eCLIP7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 NRDCO43847 1150 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 NPHS1O60500 1241 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 ZBTB48P10074 688 aaPredicted RBP7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 BDNFP23560 247 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 IKZF1Q13422 519 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 PRSS36Q5K4E3 855 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 FAM102BQ5T8I3 360 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 OTOP1Q7RTM1 612 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 SPATS2Q86XZ4 545 aaKnown RBP7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 CNTD1Q8N815 330 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 SH3RF2Q8TEC5 729 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 EMC7Q9NPA0 242 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 PRDM7Q9NQW5 492 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 MARCH2Q9P0N8 246 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 TAGLN3Q9UI15 199 aa7.23□□□□□ -1.25
CTNNA1-202ENST00000517533 TGM5O43548 720 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 ZEB2O60315 1214 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 IL2P60568 153 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 LACTBP83111 547 aaPredicted RBP7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 HLA-DQA1Q5Y7H0 255 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 NXNQ6DKJ4 435 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 PLCD4Q9BRC7 762 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 MS4A5Q9H3V2 200 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 PPCSQ9HAB8 311 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 SP110Q9HB58 689 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 PTPRHQ9HD43 1115 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 CATSPERZQ9NTU4 200 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 TNFRSF10DQ9UBN6 386 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 TRHDEQ9UKU6 1024 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 X6R8D5 127 aa7.22□□□□□ -1.25
CTNNA1-202ENST00000517533 MYO1BO43795 1136 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 FUCA1P04066 466 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 FURINP09958 794 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 CPEP16870 476 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 LSSP48449 732 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 SETQ01105 290 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 MVKQ03426 396 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 LMOD3Q0VAK6 560 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 SEC23AQ15436 765 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 HSF5Q4G112 596 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 CBARPQ8N350 705 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 MAGEB6Q8N7X4 407 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 E2F7Q96AV8 911 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 TMEM169Q96HH4 297 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 SENP7Q9BQF6 1050 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 OXSMQ9NWU1 459 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 SLAMF8Q9P0V8 285 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 ZNF180Q9UJW8 692 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 FBXO9Q9UK97 447 aaPredicted RBP7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 APOBEC2Q9Y235 224 aaKnown RBP7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 TNKSO95271 1327 aa7.21□□□□□ -1.26
CTNNA1-202ENST00000517533 C22orf46C9J442 243 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 H7BY64 318 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 MAN2B1O00754 1011 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 MSTNO14793 375 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 KRT15P19012 456 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 CD53P19397 219 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 ENDOUP21128 410 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 TACR1P25103 407 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 ST5P78524 1137 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 INO80DQ53TQ3 878 aaPredicted RBP7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 FAM47CQ5HY64 1035 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 DGKHQ86XP1 1220 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 PTRH1Q86Y79 214 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 PASD1Q8IV76 773 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 FAM9BQ8IZU0 186 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 PIP4K2CQ8TBX8 421 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 PPM1EQ8WY54 764 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 NAP1L4Q99733 375 aaKnown RBP7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 CABP5Q9NP86 173 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 CASS4Q9NQ75 786 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 C19orf73Q9NVV2 129 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 IMPACTQ9P2X3 320 aa7.2□□□□□ -1.26
CTNNA1-202ENST00000517533 LCHNA4D1U4 455 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 GAS7O60861 476 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 GTF2A2P52657 109 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 ERVFC1P60507 584 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 ERVK-21P61565 698 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 ZP2Q05996 745 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 POU5F1BQ06416 359 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 ATP13A4Q4VNC1 1196 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 TIGD5Q53EQ6 642 aa7.19□□□□□ -1.26
CTNNA1-202ENST00000517533 ANGEL2Q5VTE6 544 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms