RNA–Protein interactions for RNA: ENST00000517525.1

PVT1-204, Transcript of Pvt1 oncogene, humanhuman

TSL 3

Gene PVT1, Length 392 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-204ENST00000517525 MXRA8Q9BRK3 442 aa28.17■■■□□ 2.1
PVT1-204ENST00000517525 NCOA5Q9HCD5 579 aaKnown RBP28.17■■■□□ 2.1
PVT1-204ENST00000517525 C6orf50Q9HD87 102 aa28.17■■■□□ 2.1
PVT1-204ENST00000517525 SH3GLB2Q9NR46 395 aa28.17■■■□□ 2.1
PVT1-204ENST00000517525 HDAC6Q9UBN7 1215 aa28.17■■■□□ 2.1
PVT1-204ENST00000517525 MYH7BA7E2Y1 1941 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 NOP56O00567 594 aaKnown RBP28.16■■■□□ 2.1
PVT1-204ENST00000517525 LGALS2P05162 132 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 GNA11P29992 359 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 HOXC8P31273 242 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 BFSP2Q13515 415 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 MTMR1Q13613 665 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 RPUSD2Q8IZ73 545 aaKnown RBP28.16■■■□□ 2.1
PVT1-204ENST00000517525 CAGE1Q8TC20 777 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 CRYGNQ8WXF5 182 aa28.16■■■□□ 2.1
PVT1-204ENST00000517525 SZT2Q5T011 3432 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 H3BRB1 525 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 ATP9AO75110 1047 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 PFKMP08237 780 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 RFC2P35250 354 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 CEP55Q53EZ4 464 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 NIPA1Q7RTP0 329 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 CCDC148Q8NFR7 591 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 HERVK_113Q902F9 699 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 VWCEQ96DN2 955 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 SLC26A6Q9BXS9 759 aa28.15■■■□□ 2.1
PVT1-204ENST00000517525 TUT1Q9H6E5 874 aaKnown RBP28.15■■■□□ 2.1
PVT1-204ENST00000517525 MEIS1O00470 390 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 SORBS3O60504 671 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 CYP3A4P08684 503 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 CCL23P55773 120 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 ZNF365Q70YC5 407 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 TRIM22Q8IYM9 498 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 CCDC155Q8N6L0 562 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 PPP1R13LQ8WUF5 828 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 ALG1Q9BT22 464 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 NOD1Q9Y239 953 aa28.14■■■□□ 2.1
PVT1-204ENST00000517525 ANKRD1Q15327 319 aa28.13■■■□□ 2.09
PVT1-204ENST00000517525 CPLX2Q6PUV4 134 aaKnown RBP28.13■■■□□ 2.09
PVT1-204ENST00000517525 RETREG2Q8NC44 543 aa28.13■■■□□ 2.09
PVT1-204ENST00000517525 BICD2Q8TD16 824 aa28.13■■■□□ 2.09
PVT1-204ENST00000517525 KCNH7Q9NS40 1196 aa28.13■■■□□ 2.09
PVT1-204ENST00000517525 TMEM260Q9NX78 707 aa28.13■■■□□ 2.09
PVT1-204ENST00000517525 IQCF3P0C7M6 154 aa28.12■■■□□ 2.09
PVT1-204ENST00000517525 ARHGAP4P98171 946 aa28.12■■■□□ 2.09
PVT1-204ENST00000517525 SSRP1Q08945 709 aaKnown RBP28.12■■■□□ 2.09
PVT1-204ENST00000517525 PTK7Q13308 1070 aa28.12■■■□□ 2.09
PVT1-204ENST00000517525 REXO1Q8N1G1 1221 aaKnown RBP28.12■■■□□ 2.09
PVT1-204ENST00000517525 AFAP1L1Q8TED9 768 aa28.12■■■□□ 2.09
PVT1-204ENST00000517525 NFASCO94856 1347 aa28.12■■■□□ 2.09
PVT1-204ENST00000517525 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.11■■■□□ 2.09
PVT1-204ENST00000517525 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.11■■■□□ 2.09
PVT1-204ENST00000517525 CPLX1O14810 134 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 DEXIO95424 95 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 FGBP02675 491 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 ACRP10323 421 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 CHMP4BP1P59074 171 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 CYP2W1Q8TAV3 490 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 SEPT1Q8WYJ6 367 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 DHX38Q92620 1227 aaKnown RBP28.11■■■□□ 2.09
PVT1-204ENST00000517525 PGBD1Q96JS3 809 aa28.11■■■□□ 2.09
PVT1-204ENST00000517525 PFKFB2O60825 505 aa28.1■■■□□ 2.09
PVT1-204ENST00000517525 PARNO95453 639 aaKnown RBP28.1■■■□□ 2.09
PVT1-204ENST00000517525 JAKMIP3Q5VZ66 844 aa28.1■■■□□ 2.09
PVT1-204ENST00000517525 SCLYQ96I15 445 aa28.1■■■□□ 2.09
PVT1-204ENST00000517525 MTIF3Q9H2K0 278 aaKnown RBP28.1■■■□□ 2.09
PVT1-204ENST00000517525 ZNF215Q9UL58 517 aaPredicted RBP28.1■■■□□ 2.09
PVT1-204ENST00000517525 GSTTP1A0A1W2PQM5 241 aa28.09■■■□□ 2.09
PVT1-204ENST00000517525 TRIM71Q2Q1W2 868 aaKnown RBP28.09■■■□□ 2.09
PVT1-204ENST00000517525 DEFB123Q8N688 67 aa28.09■■■□□ 2.09
PVT1-204ENST00000517525 LARP6Q9BRS8 491 aaKnown RBP28.09■■■□□ 2.09
PVT1-204ENST00000517525 TPCN1Q9ULQ1 816 aa28.09■■■□□ 2.09
PVT1-204ENST00000517525 TELO2Q9Y4R8 837 aa28.09■■■□□ 2.09
PVT1-204ENST00000517525 TMEM265A0A087WTH1 108 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 ADAMTS3O15072 1205 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 CDKL5O76039 1030 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 SEC24BO95487 1268 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 HIC1Q14526 733 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 SERINC5Q86VE9 423 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 AGO4Q9HCK5 861 aaKnown RBP28.08■■■□□ 2.09
PVT1-204ENST00000517525 JPH1Q9HDC5 661 aaPredicted RBP28.08■■■□□ 2.09
PVT1-204ENST00000517525 MTMR10Q9NXD2 777 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 VPS54Q9P1Q0 977 aa28.08■■■□□ 2.09
PVT1-204ENST00000517525 SMIM10L2AP0DMW4 78 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 SMIM10L2BP0DMW5 78 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 ARP10275 920 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 SELPP16109 830 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 CIITAP33076 1130 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 TCF7P36402 384 aaPredicted RBP28.07■■■□□ 2.08
PVT1-204ENST00000517525 SCRN1Q12765 414 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 SLKQ9H2G2 1235 aaPredicted RBP28.07■■■□□ 2.08
PVT1-204ENST00000517525 RNPEPQ9H4A4 650 aa28.07■■■□□ 2.08
PVT1-204ENST00000517525 IGLV3-22A0A075B6J6 115 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 C17orf102A2RUQ5 167 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 FAM86B1E9PN63 330 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 LGR5O75473 907 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 FAM86B2P0C5J1 330 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 GNAT1P11488 350 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 AK2P54819 239 aa28.06■■■□□ 2.08
PVT1-204ENST00000517525 ADAM17P78536 824 aa28.06■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms