RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 PLAGL2Q9UPG8 496 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 DNM3Q9UQ16 869 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 RIMS1Q86UR5 1692 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SETD1BQ9UPS6 1966 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 hCG_1984214I3L0E3 225 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 TFRCP02786 760 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SLC1A4P43007 532 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CARSP49589 748 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 ADCY2Q08462 1091 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 LRRC41Q15345 812 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 TEX11Q8IYF3 940 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CNPY4Q8N129 248 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 ZNF713Q8N859 430 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SPATA20Q8TB22 786 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CHMP6Q96FZ7 201 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 C7orf25Q9BPX7 421 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 AP1M1Q9BXS5 423 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 TRIM9Q9C026 710 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 ZMYND12Q9H0C1 365 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 VCPKMTQ9H867 229 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SLC40A1Q9NP59 571 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 FAM217BQ9NTX9 383 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 TFR2Q9UP52 801 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PXDNQ92626 1479 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 AKAP12Q02952 1782 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PEAK1Q9H792 1746 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 A0A0U1RQJ8 604 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 AFPP02771 609 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 HLA-DOAP06340 250 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SF3A3Q12874 501 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PTPROQ16827 1216 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CCDC38Q502W7 563 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 NBPF5PQ86XG9 351 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 TEX2Q8IWB9 1127 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 MYCBPAPQ8TBZ2 947 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 TBCKQ8TEA7 893 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 KLHL29Q96CT2 875 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 CCDC87Q9NVE4 849 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 DMGDHQ9UI17 866 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PCDHA12Q9UN75 941 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 PP2D1A8MPX8 630 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 MMEP08473 750 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 IL6STP40189 918 aaPredicted RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 AP1ARQ63HQ0 302 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 ALKBH5Q6P6C2 394 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 STAG2Q8N3U4 1231 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 MGARPQ8TDB4 240 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 MAIP1Q8WWC4 291 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 ASIC3Q9UHC3 531 aa7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SAP30BPQ9UHR5 308 aaKnown RBP7.27□□□□□ -1.25
CPNE3-203ENST00000517490 SPDYE3A6NKU9 549 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ORC4O43929 436 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 FSBPO95073 299 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 BCRP11274 1271 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 PLTPP55058 493 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 DR1Q01658 176 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 TRAF1Q13077 416 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 MEA1Q16626 185 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 TXNRD1Q16881 649 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 FAM133BQ5BKY9 247 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 RBM26Q5T8P6 1007 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 FYB2Q5VWT5 728 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ARHGAP27Q6ZUM4 889 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SRBD1Q8N5C6 995 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 MS4A14Q96JA4 679 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 NBPF3Q9H094 633 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 NWD1Q149M9 1564 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 NR2F2P24468 414 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 IFNAR2P48551 515 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SEC24CP53992 1094 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ZBTB16Q05516 673 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 USP37Q86T82 979 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 CCDC13Q8IYE1 715 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ANKRD42Q8N9B4 389 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SEC16BQ96JE7 1060 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 EYA3Q99504 573 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ISCUQ9H1K1 167 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SEC31BQ9NQW1 1179 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 FBXL5Q9UKA1 691 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ZNF142P52746 1687 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 PASKQ96RG2 1323 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 GOLGA8HP0CJ92 632 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ABCB4P21439 1286 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 HDLBPQ00341 1268 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 GSTA5Q7RTV2 222 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 YTHDF3Q7Z739 585 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 TBC1D1Q86TI0 1168 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 ZSCAN29Q8IWY8 852 aaPredicted RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SGSM3Q96HU1 749 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 GPCPD1Q9NPB8 672 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 BATF3Q9NR55 127 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 HAUS2Q9NVX0 235 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 DDX25Q9UHL0 483 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 FCER1AP12319 257 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 GCFC2P16383 781 aaKnown RBP7.26□□□□□ -1.25
CPNE3-203ENST00000517490 PDE6CP51160 858 aa7.26□□□□□ -1.25
CPNE3-203ENST00000517490 SLC18A3Q16572 532 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms