RNA–Protein interactions for RNA: ENST00000517403.5

PABPC1-202, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-202ENST00000517403 TMEM67Q5HYA8 995 aa10.03□□□□□ -0.8
PABPC1-202ENST00000517403 CELF3Q5SZQ8 465 aaKnown RBP10.03□□□□□ -0.8
PABPC1-202ENST00000517403 PPTC7Q8NI37 304 aa10.03□□□□□ -0.8
PABPC1-202ENST00000517403 INPP4AQ96PE3 977 aaPredicted RBP10.03□□□□□ -0.8
PABPC1-202ENST00000517403 FAM117AQ9C073 453 aa10.03□□□□□ -0.8
PABPC1-202ENST00000517403 MRPL11Q9Y3B7 192 aaKnown RBP10.03□□□□□ -0.8
PABPC1-202ENST00000517403 CUL9Q8IWT3 2517 aa10.03□□□□□ -0.8
PABPC1-202ENST00000517403 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
PABPC1-202ENST00000517403 MYO9BQ13459 2157 aa10.02□□□□□ -0.8
PABPC1-202ENST00000517403 NLRC5Q86WI3 1866 aa10.02□□□□□ -0.8
PABPC1-202ENST00000517403 ZEB2O60315 1214 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 ATP9AO75110 1047 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 LGR5O75473 907 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 CPA1P15085 419 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 WDR5P61964 334 aaKnown RBP10.02□□□□□ -0.81
PABPC1-202ENST00000517403 TFF2Q03403 129 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 KIAA0753Q2KHM9 967 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 ZNF618Q5T7W0 954 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 CREB3L3Q68CJ9 461 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.02□□□□□ -0.812e-26■■■■□ 24.7
PABPC1-202ENST00000517403 LRRC8DQ7L1W4 858 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 NCOA7Q8NI08 942 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 PGBD1Q96JS3 809 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 IWS1Q96ST2 819 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 SPZ1Q9BXG8 430 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
PABPC1-202ENST00000517403 RTEL1Q9NZ71 1219 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 MRVI1Q9Y6F6 885 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 SLC4A7Q9Y6M7 1214 aa10.02□□□□□ -0.81
PABPC1-202ENST00000517403 PNMA6FA0A0J9YX94 578 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 EIF3JO75822 258 aaKnown RBP10.01□□□□□ -0.81
PABPC1-202ENST00000517403 CXCL10P02778 98 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 LGALS2P05162 132 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 ITGB5P18084 799 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 ADAM17P78536 824 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 CCDC178Q5BJE1 867 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 PPP1R15BQ5SWA1 713 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 PPP2R2DQ66LE6 453 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 HERC6Q8IVU3 1022 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 GDPD5Q8WTR4 605 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 SPATA33Q96N06 139 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 RAPGEFL1Q9UHV5 662 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 PCDHA11Q9Y5I1 949 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 LOXHD1Q8IVV2 1947 aa10.01□□□□□ -0.81
PABPC1-202ENST00000517403 TREHO43280 583 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 LINC00271P0C7V0 271 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 NT5C2P49902 561 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 KCNQ1P51787 676 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 SP4Q02446 784 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 PTPN11Q06124 597 aaPredicted RBP10□□□□□ -0.81
PABPC1-202ENST00000517403 RAB30Q15771 203 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 RUFY4Q6ZNE9 571 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 RALYLQ86SE5 291 aaKnown RBP10□□□□□ -0.81
PABPC1-202ENST00000517403 SERINC5Q86VE9 423 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 MCF2L2Q86YR7 1114 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 KHSRPQ92945 711 aaKnown RBP eCLIP10□□□□□ -0.811e-6■■□□□ 12.3
PABPC1-202ENST00000517403 PCYT2Q99447 389 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 GPR20Q99678 358 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 PNMA2Q9UL42 364 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 MTCH2Q9Y6C9 303 aa10□□□□□ -0.81
PABPC1-202ENST00000517403 SPATA31C2B4DYI2 1134 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 GCOM1H8Y6P7 765 aaPredicted RBP9.99□□□□□ -0.81
PABPC1-202ENST00000517403 EDIL3O43854 480 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 DTNBO60941 627 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 DDAH1O94760 285 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 CTSHP09668 335 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 POLR2MP0CAP2 368 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 SMIM10L2AP0DMW4 78 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 SMIM10L2BP0DMW5 78 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 SELPP16109 830 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 KCNA2P16389 499 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 IGFBP4P22692 258 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 CDC27P30260 824 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 ICAM3P32942 547 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 GRB10Q13322 594 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 DGKDQ16760 1214 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 WWC2Q6AWC2 1192 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 TMTC3Q6ZXV5 915 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 CYFIP1Q7L576 1253 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 DHX37Q8IY37 1157 aaKnown RBP9.99□□□□□ -0.81
PABPC1-202ENST00000517403 CCDC82Q8N4S0 544 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 CYP2W1Q8TAV3 490 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 AFAP1L1Q8TED9 768 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 RNPEPQ9H4A4 650 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 SLC28A3Q9HAS3 691 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 SETD4Q9NVD3 440 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 TMEM260Q9NX78 707 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 PKD2L1Q9P0L9 805 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 WDR81Q562E7 1941 aa9.99□□□□□ -0.81
PABPC1-202ENST00000517403 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.98□□□□□ -0.81
PABPC1-202ENST00000517403 GSTTP1A0A1W2PQM5 241 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 LINC01553A4QN01 128 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 KPNA6O60684 536 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 PFKMP08237 780 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 SUPT20HL2P0C7V6 817 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 CCND2P30279 289 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 EXOSC10Q01780 885 aaKnown RBP9.98□□□□□ -0.81
PABPC1-202ENST00000517403 LAMC2Q13753 1193 aa9.98□□□□□ -0.81
PABPC1-202ENST00000517403 FAM117BQ6P1L5 589 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms