RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 FKTNO75072 461 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 GNAT1P11488 350 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 FOSL1P15407 271 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 LSP1P33241 339 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 GJA4P35212 333 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 GRIK1P39086 918 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 JAM2P57087 298 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PURAQ00577 322 aaKnown RBP4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PRKCQQ04759 706 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 EGR3Q06889 387 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 DUSP4Q13115 394 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 MOGSQ13724 837 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 GTF2H3Q13889 308 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 GBX1Q14549 363 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PTPN21Q16825 1174 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 MAP9Q49MG5 647 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 BROXQ5VW32 411 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ARHGAP27Q6ZUM4 889 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 HDGFL2Q7Z4V5 671 aaPredicted RBP4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 CPNE8Q86YQ8 564 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZDHHC13Q8IUH4 622 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 SMC5Q8IY18 1101 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 NLGN4XQ8N0W4 816 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 FBXL6Q8N531 539 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 KIAA1958Q8N8K9 716 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PHOSPHO1Q8TCT1 267 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PLEKHO2Q8TD55 490 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 MORC4Q8TE76 937 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 LMBR1Q8WVP7 490 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PMM1Q92871 262 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 HRASLS5Q96KN8 279 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ACAP3Q96P50 834 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZDHHC5Q9C0B5 715 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 MYH16Q9H6N6 1097 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZMAT4Q9H898 229 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 VTA1Q9NP79 307 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 SLC6A20Q9NP91 592 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 PRDM11Q9NQV5 511 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ACSS2Q9NR19 701 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ATG3Q9NT62 314 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 LMCD1Q9NZU5 365 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 H2AFY2Q9P0M6 372 aaPredicted RBP4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZSWIM5Q9P217 1185 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ANKRD6Q9Y2G4 727 aa4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 ARID4BQ4LE39 1312 aaPredicted RBP4.4□□□□□ -1.71
RNU6-840P-201ENST00000517275 LOC102724159A0A0B4J2E5 919 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 WTIPA6NIX2 430 aaPredicted RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 DVL2O14641 736 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PRPF3O43395 683 aaKnown RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 HIP1RO75146 1068 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PEX14O75381 377 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 DGKIO75912 1065 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 CYP17A1P05093 508 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 KRT18P05783 430 aaKnown RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 MYBL2P10244 700 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 FSTP19883 344 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 HDAC1Q13547 482 aaPredicted RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PWP2Q15269 919 aaKnown RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 EPHA7Q15375 998 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZNF174Q15697 407 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 MSMPQ1L6U9 139 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 GORABQ5T7V8 394 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 FSTL4Q6MZW2 842 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 WAPLQ7Z5K2 1190 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 CERS3Q8IU89 383 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 CREG2Q8IUH2 290 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PLD6Q8N2A8 252 aaKnown RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 SH3RF2Q8TEC5 729 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 ASIC4Q96FT7 647 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 FAXDC2Q96IV6 333 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 HHIPL1Q96JK4 782 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PSMD1Q99460 953 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 WNT8AQ9H1J5 351 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 ATP13A1Q9HD20 1204 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 KCNH7Q9NS40 1196 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 CATSPERZQ9NTU4 200 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 C14orf119Q9NWQ9 140 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 PIM2Q9P1W9 311 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 VAV3Q9UKW4 847 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZNF652Q9Y2D9 606 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 LUC7L2Q9Y383 392 aaKnown RBP4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 NUB1Q9Y5A7 615 aa4.39□□□□□ -1.71
RNU6-840P-201ENST00000517275 FAM181BA6NEQ2 426 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 PRR19A6NJB7 356 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 MAFKO60675 156 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 SNUPNO95149 360 aaKnown RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 TRIM27P14373 513 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 LPOP22079 712 aaPredicted RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 FPR2P25090 351 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 CD40P25942 277 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 CYP2C19P33261 490 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 GPR3P46089 330 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 CHRNA2Q15822 529 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 VPS72Q15906 364 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ANGEL2Q5VTE6 544 aaKnown RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ESRP1Q6NXG1 681 aaKnown RBP4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ZPBP2Q6X784 338 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 ARHGAP36Q6ZRI8 547 aa4.38□□□□□ -1.71
RNU6-840P-201ENST00000517275 CEP68Q76N32 757 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms