RNA–Protein interactions for RNA: ENST00000516595.1

SCARNA16.3-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 184 nt, Biotype scaRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.3-201ENST00000516595 PF4P02776 101 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 HLA-DOAP06340 250 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FGRP09769 529 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 HSPD1P10809 573 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 YY1P25490 414 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MCM4P33991 863 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CD68P34810 354 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 EIF4A3P38919 411 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LIG3P49916 1009 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FKBP1BP68106 108 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FAM160A1Q05DH4 1040 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GABPAQ06546 454 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FSTL1Q12841 308 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NMIQ13287 307 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 AP3B2Q13367 1082 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SETDB1Q15047 1291 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GRIK4Q16099 956 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NBPF9Q3BBW0 867 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TBC1D10BQ4KMP7 808 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LDLRAD1Q5T700 205 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LCE2CQ5TA81 110 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ANGEL2Q5VTE6 544 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PCNX4Q63HM2 1172 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DCAF15Q66K64 600 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LLGL2Q6P1M3 1020 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CDC37L1Q7L3B6 337 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TTC6Q86TZ1 520 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ZNF589Q86UQ0 364 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MAP4K3Q8IVH8 894 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TEX11Q8IYF3 940 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LCORLQ8N3X6 602 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GOLM1Q8NBJ4 401 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SMC1BQ8NDV3 1235 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GRIN3AQ8TCU5 1115 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FAM151AQ8WW52 585 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 WNT8BQ93098 351 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PRMT6Q96LA8 375 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FAM227BQ96M60 508 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TMEM74Q96NL1 305 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 STRBPQ96SI9 672 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MDFIQ99750 246 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MTA3Q9BTC8 594 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SPON2Q9BUD6 331 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 RSRP1Q9BUV0 290 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NACAP1Q9BZK3 213 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LSG1Q9H089 658 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PUS7LQ9H0K6 701 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 MIR1-1HGQ9H1L0 117 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 IL25Q9H293 177 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TDRD3Q9H7E2 651 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ZNF287Q9HBT7 754 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 EPB41L4AQ9HCS5 686 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NMRK2Q9NPI5 230 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DCP1AQ9NPI6 582 aaPredicted RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DDX4Q9NQI0 724 aaKnown RBP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GINM1Q9NU53 330 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 USP40Q9NVE5 1235 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 AATFQ9NY61 560 aaKnown RBP eCLIP2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SWAP70Q9UH65 585 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CTNNA3Q9UI47 895 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SERPINB13Q9UIV8 391 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ANAPC4Q9UJX5 808 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CYP8B1Q9UNU6 501 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FOCADQ5VW36 1801 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SSC5DA1L4H1 1573 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PASKQ96RG2 1323 aa2.6□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LAMB1P07942 1786 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NAV1Q8NEY1 1877 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 A0A0A0MRY4 1105 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SHTN1A0MZ66 631 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CLRN2A0PK11 232 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TLR3O15455 904 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SART1O43290 800 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ORC4O43929 436 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 FGAP02671 866 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CHGBP05060 677 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CYP21A2P08686 494 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 GSTP1P09211 210 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NID1P14543 1247 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 LIG1P18858 919 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 BMP6P22004 513 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DNAJA1P31689 397 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NF2P35240 595 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NOVP48745 357 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 TDO2P48775 406 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DGKGP49619 791 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 RBM5P52756 815 aaKnown RBP eCLIP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 ANAPC15P60006 121 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 DYNLL1P63167 89 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 RACK1P63244 317 aaKnown RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 PPARAQ07869 468 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NFIAQ12857 509 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 CAMK2GQ13555 558 aaPredicted RBP2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 KRT32Q14532 448 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 RASA3Q14644 834 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NECTIN1Q15223 517 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 SUPT20HL1Q3ZLR7 823 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 NAALADL2Q58DX5 795 aa2.59□□□□□ -1.99
SCARNA16.3-201ENST00000516595 EXOSC6Q5RKV6 272 aaKnown RBP2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms