RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 GPR135Q8IZ08 494 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 D2HGDHQ8N465 521 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 NAT16Q8N8M0 369 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 ACRBPQ8NEB7 543 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 CFHR4Q92496 578 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 TRMOQ9BU70 441 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 KATNBL1Q9H079 304 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 TRPS1Q9UHF7 1281 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 TRAK1Q9UPV9 953 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 AKAP2Q9Y2D5 859 aa0.44□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZNF804BA4D1E1 1349 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 XDHP47989 1333 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 FGF10O15520 208 aaPredicted RBP0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 CYP27B1O15528 508 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 FZD6O60353 706 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 GSTM1P09488 218 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 PDE6AP16499 860 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 L1CAMP32004 1257 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 USP5P45974 858 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 SLC6A11P48066 632 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 NOVP48745 357 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 SEC24CP53992 1094 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 TBR1Q16650 682 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 KRTAP24-1Q3LI83 254 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 PHF19Q5T6S3 580 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 WWC2Q6AWC2 1192 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 CRTC3Q6UUV7 619 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZNF788Q6ZQV5 615 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 C18orf65Q6ZTR6 163 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 ADGRE4PQ86SQ3 457 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 CABP7Q86V35 215 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 ARHGEF25Q86VW2 580 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 FAM126BQ8IXS8 530 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 SYNE4Q8N205 404 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 LZTR1Q8N653 840 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 FAM13CQ8NE31 585 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 SUPT20HQ8NEM7 779 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 DPF1Q92782 380 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 C16orf92Q96LL3 132 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 MTA3Q9BTC8 594 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 SLC12A9Q9BXP2 914 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 C12orf65Q9H3J6 166 aaKnown RBP0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 CHST7Q9NS84 486 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 ADAM30Q9UKF2 790 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 TLK1Q9UKI8 766 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 CYP8B1Q9UNU6 501 aa0.43□□□□□ -2.34
RNU6-542P-201ENST00000516405 CENPVL1A0A0U1RR11 272 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 LPXNO60711 386 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 KNG1P01042 644 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 NTRK1P04629 796 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 USP14P54578 494 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 NKX3-2P78367 333 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 EIF2B5Q13144 721 aaKnown RBP0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 ORC1Q13415 861 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 USP10Q14694 798 aaKnown RBP0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 EZH2Q15910 746 aaKnown RBP0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 SRSF7Q16629 238 aaKnown RBP eCLIP0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 ERCC6LQ2NKX8 1250 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 MTX3Q5HYI7 312 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 RABL3Q5HYI8 236 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 PCNX4Q63HM2 1172 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 CCDC62Q6P9F0 684 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 TPTE2Q6XPS3 522 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 RFX6Q8HWS3 928 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 SLFN12Q8IYM2 578 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 DBF4BQ8NFT6 615 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 HELQQ8TDG4 1101 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 EPS8L3Q8TE67 593 aaKnown RBP0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 LINC00476Q8WZB0 136 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZNF414Q96IQ9 312 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 SERHL2Q9H4I8 314 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 VRTNQ9H8Y1 702 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 CCDC87Q9NVE4 849 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 SH3BP1Q9Y3L3 701 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 SAMM50Q9Y512 469 aa0.42□□□□□ -2.34
RNU6-542P-201ENST00000516405 ACIN1Q9UKV3 1341 aaKnown RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 A0A087WYN8 130 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 GRXCR1A8MXD5 290 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 TNFRSF13BO14836 293 aaPredicted RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 FBXO24O75426 580 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 PLGP00747 810 aaPredicted RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 XRCC5P13010 732 aaKnown RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 CNGB1Q14028 1251 aaPredicted RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 ATXN7L2Q5T6C5 722 aaPredicted RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 ZNF626Q68DY1 528 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 CYP2R1Q6VVX0 501 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 AEBP1Q8IUX7 1158 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 C3orf58Q8NDZ4 430 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 WFIKKN2Q8TEU8 576 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 TMEM176AQ96HP8 235 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 CCDC74BQ96LY2 380 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 WDR11Q9BZH6 1224 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 AGO3Q9H9G7 860 aaKnown RBP0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 COG6Q9Y2V7 657 aa0.41□□□□□ -2.34
RNU6-542P-201ENST00000516405 TTC3P53804 2025 aa0.4□□□□□ -2.34
RNU6-542P-201ENST00000516405 CHURC1-FNTBB4DL54 471 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 MGST3O14880 152 aa0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 CLASP2O75122 1294 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 CPNE3O75131 537 aaKnown RBP0.4□□□□□ -2.35
RNU6-542P-201ENST00000516405 PPP1R15AO75807 674 aaPredicted RBP0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms