RNA–Protein interactions for RNA: ENST00000516259.1

RNU6-390P-201, Transcript of RNA, U6 small nuclear 390, pseudogene, humanhuman

BASIC

Gene RNU6-390P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-390P-201ENST00000516259 SDHAP31040 664 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 ERVK-21P61565 698 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 HERVK_113P62684 666 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SMAD3P84022 425 aaKnown RBP4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 MVKQ03426 396 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 ZNF174Q15697 407 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SMAD2Q15796 467 aaKnown RBP4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SLC14A2Q15849 920 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 CEP128Q6ZU80 1094 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 LHFPL2Q6ZUX7 228 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SPRED2Q7Z698 418 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 CABP7Q86V35 215 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 OSTM1Q86WC4 334 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 RASSF3Q86WH2 238 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 NME9Q86XW9 330 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 DCP2Q8IU60 420 aaKnown RBP4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 CNTD1Q8N815 330 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 ZNF610Q8N9Z0 462 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 CHTF18Q8WVB6 975 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SSH1Q8WYL5 1049 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SEC14L1Q92503 715 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 SLC5A5Q92911 643 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 CHAMP1Q96JM3 812 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 MARCH2Q9P0N8 246 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 PPARGC1AQ9UBK2 798 aaKnown RBP4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 GULP1Q9UBP9 304 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 DSEQ9UL01 958 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 FAN1Q9Y2M0 1017 aa4.47□□□□□ -1.69
RNU6-390P-201ENST00000516259 TCRBV5S4A2TA0A5A2 114 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 MAN2B1O00754 1011 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 GABRDO14764 452 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 HIP1RO75146 1068 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 KATNA1O75449 491 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 RFPL1O75677 317 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 ZBTB7AO95365 584 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 FUCA1P04066 466 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 U2AF1L5P0DN76 240 aaPredicted RBP4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 PNLIPP16233 465 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 LSP1P33241 339 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 JAM2P57087 298 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 TMPRSS15P98073 1019 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 IRF9Q00978 393 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 U2AF1Q01081 240 aaKnown RBP eCLIP4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 ITKQ08881 620 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 BNIP3Q12983 259 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 TERF2Q15554 542 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 RALGPS1Q5JS13 557 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 NXNQ6DKJ4 435 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 IQSEC1Q6DN90 963 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 NLRX1Q86UT6 975 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 SH3RF2Q8TEC5 729 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 ORAI2Q96SN7 254 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 JAM3Q9BX67 310 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 CDH19Q9H159 772 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 WNT8AQ9H1J5 351 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 PAK6Q9NQU5 681 aaPredicted RBP4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 KCNH7Q9NS40 1196 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 SPTLC3Q9NUV7 552 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 THG1LQ9NWX6 298 aaKnown RBP4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 SLAMF8Q9P0V8 285 aa4.46□□□□□ -1.7
RNU6-390P-201ENST00000516259 A0A1W2PQ27 194 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 A0A1W2PQ64 194 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 A0A1W2PQC6 194 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 A0A1W2PQD8 194 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 SHTN1A0MZ66 631 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 KIF3BO15066 747 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 TGM5O43548 720 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 PRKD3O94806 890 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 CFBP00751 764 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 CYBBP04839 570 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 FPR2P25090 351 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 ARL4AP40617 200 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 ID4P47928 161 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 ERVFRD-1P60508 538 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 ADCY1Q08828 1119 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 KLF1Q13351 362 aaPredicted RBP4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 SLC9A5Q14940 896 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 NR1I3Q14994 352 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 EPHA7Q15375 998 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 SKOR2Q2VWA4 1001 aaPredicted RBP4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 TMEM240Q5SV17 173 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 STEAP3Q658P3 488 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 NFXL1Q6ZNB6 911 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 KCTD1Q719H9 257 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 NOL8Q76FK4 1167 aaKnown RBP4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 TEX2Q8IWB9 1127 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 CBARPQ8N350 705 aaPredicted RBP4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 KIAA1958Q8N8K9 716 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 SHISA4Q96DD7 197 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 PEX11GQ96HA9 241 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 GPR101Q96P66 508 aaPredicted RBP4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 KCNJ15Q99712 375 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 TRIM8Q9BZR9 551 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 RC3H2Q9HBD1 1191 aaKnown RBP4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 TNFRSF12AQ9NP84 129 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 IMPACTQ9P2X3 320 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 NUDT5Q9UKK9 219 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 TRHDEQ9UKU6 1024 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 ATP23Q9Y6H3 246 aa4.45□□□□□ -1.7
RNU6-390P-201ENST00000516259 HRKO00198 91 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms