RNA–Protein interactions for RNA: ENST00000516151.1

RNU6-559P-201, Transcript of RNA, U6 small nuclear 559, pseudogene, humanhuman

BASIC

Gene RNU6-559P, Length 98 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-559P-201ENST00000516151 KRIT1O00522 736 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 GPR42O15529 346 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 COL6A1P12109 1028 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 PPP2CBP62714 309 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 PPP2CAP67775 309 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 ICAM4Q14773 271 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 SLC10A6Q3KNW5 377 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 SLFN13Q68D06 897 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 ARHGEF18Q6ZSZ5 1173 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 CIR1Q86X95 450 aaPredicted RBP4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 PROSER1Q86XN7 944 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 TRIM48Q8IWZ4 208 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 KBTBD2Q8IY47 623 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 SLC16A11Q8NCK7 471 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 IGDCC4Q8TDY8 1250 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 MICAL1Q8TDZ2 1067 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 KCTD13Q8WZ19 329 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 PDGFDQ9GZP0 370 aaPredicted RBP4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 SLC6A20Q9NP91 592 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 GPR27Q9NS67 375 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 CROTQ9UKG9 612 aa4.6□□□□□ -1.67
RNU6-559P-201ENST00000516151 GJB6O95452 261 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 CHGBP05060 677 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 TACR2P21452 398 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 PPP2R2AP63151 447 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 NFATC3Q12968 1075 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 TRMT10BQ6PF06 316 aaKnown RBP4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 RSPO2Q6UXX9 243 aaPredicted RBP4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 TMC5Q6UXY8 1006 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 DTX3Q8N9I9 347 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 KLC2Q9H0B6 622 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 BARX1Q9HBU1 254 aaPredicted RBP4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 DLL4Q9NR61 685 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 ADAM29Q9UKF5 820 aa4.59□□□□□ -1.67
RNU6-559P-201ENST00000516151 PATE3B3GLJ2 98 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 FGRP09769 529 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 C6P13671 934 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 ETFBP38117 255 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 SELENOPP49908 381 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 GNL2Q13823 731 aaKnown RBP4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 CRIP3Q6Q6R5 217 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 SPRED1Q7Z699 444 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 SH3RF3Q8TEJ3 882 aaPredicted RBP4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 MEGF9Q9H1U4 602 aa4.58□□□□□ -1.68
RNU6-559P-201ENST00000516151 A0A1W2PQU0 124 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 DLX3O60479 287 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 KLHL18O94889 574 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 FSHBP01225 129 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 ERCC5P28715 1186 aaPredicted RBP4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 GRIA2P42262 883 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 VASNQ6EMK4 673 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 PIP4K2CQ8TBX8 421 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 SGSM3Q96HU1 749 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 SORCS2Q96PQ0 1159 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 SEMA4AQ9H3S1 761 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 ZNF408Q9H9D4 720 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 NUB1Q9Y5A7 615 aa4.57□□□□□ -1.68
RNU6-559P-201ENST00000516151 SLC27A2O14975 620 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 MSCO60682 206 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 KNG1P01042 644 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 GDF5P43026 501 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 R3HDM1Q15032 1099 aaKnown RBP4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 SMAD2Q15796 467 aaKnown RBP4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 HABP4Q5JVS0 413 aaKnown RBP4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 Q6ZUG5 572 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 OTOP3Q7RTS5 596 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 RALYLQ86SE5 291 aaKnown RBP4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 Q8N1X5 172 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 NUDT10Q8NFP7 164 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 UHMK1Q8TAS1 419 aaKnown RBP4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 CLEC4DQ8WXI8 215 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 NUDT11Q96G61 164 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 AJUBAQ96IF1 538 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 ZFYVE21Q9BQ24 234 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 IER2Q9BTL4 223 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 PHF20Q9BVI0 1012 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 JAM3Q9BX67 310 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 SEC61A2Q9H9S3 476 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 JADE2Q9NQC1 790 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 RBPJLQ9UBG7 517 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 TCAF1Q9Y4C2 921 aa4.56□□□□□ -1.68
RNU6-559P-201ENST00000516151 CYR61O00622 381 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 B4GALT4O60513 344 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 CNOT4O95628 575 aaKnown RBP4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 FAHP16930 419 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 GRK2P25098 689 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 GRK3P35626 688 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 ACVRL1P37023 503 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 HSP90AA2PQ14568 343 aaPredicted RBP4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 KIZQ2M2Z5 673 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 PAN2Q504Q3 1202 aaKnown RBP4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 LBX2Q6XYB7 198 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 USP53Q70EK8 1073 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 REXO1L1PQ8IX06 675 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 DCAF4Q8WV16 495 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 WWC2-AS2Q96NR7 200 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 TINF2Q9BSI4 451 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 ZNF747Q9BV97 191 aa4.55□□□□□ -1.68
RNU6-559P-201ENST00000516151 SCAND2PQ9GZW5 306 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms