RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 CDC37Q16543 378 aaPredicted RBP12.29□□□□□ -0.44
CLDND1-231ENST00000515620 HSDL1Q3SXM5 330 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 ARHGEF16Q5VV41 709 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 SMRP1Q8NCR6 262 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 MSLNLQ96KJ4 702 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 SPATA33Q96N06 139 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 ANAPC4Q9UJX5 808 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 RWDD3Q9Y3V2 267 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 ABCB11O95342 1321 aa12.29□□□□□ -0.44
CLDND1-231ENST00000515620 CCER2I3L3R5 266 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 TREHO43280 583 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 PPFIA4O75335 1185 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 EIF3JO75822 258 aaKnown RBP12.28□□□□□ -0.44
CLDND1-231ENST00000515620 EYA4O95677 639 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 GOLGA8HP0CJ92 632 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 SMIM10L2AP0DMW4 78 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 SMIM10L2BP0DMW5 78 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 RRP1P56182 461 aaKnown RBP12.28□□□□□ -0.44
CLDND1-231ENST00000515620 ADAM15Q13444 863 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 VPS53Q5VIR6 699 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 APBB2Q92870 758 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 C16orf70Q9BSU1 422 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 IRF2BPLQ9H1B7 796 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 CLEC1BQ9P126 229 aa12.28□□□□□ -0.44
CLDND1-231ENST00000515620 USP15Q9Y4E8 981 aaPredicted RBP12.28□□□□□ -0.44
CLDND1-231ENST00000515620 H0Y858 1186 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 CAND2O75155 1236 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 KDM4AO75164 1064 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 GGPS1O95749 300 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 NR3C2P08235 984 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 SNHG28P0DPA3 235 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 AVPR2P30518 371 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 HOXC8P31273 242 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 CBX2Q14781 532 aaPredicted RBP12.27□□□□□ -0.45
CLDND1-231ENST00000515620 CELF3Q5SZQ8 465 aaKnown RBP12.27□□□□□ -0.45
CLDND1-231ENST00000515620 MYSM1Q5VVJ2 828 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 ADGRD2Q7Z7M1 963 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 MCF2L2Q86YR7 1114 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 CLP1Q92989 425 aaKnown RBP12.27□□□□□ -0.45
CLDND1-231ENST00000515620 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 ASIC4Q96FT7 647 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 RPGRIP1Q96KN7 1286 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 UBA5Q9GZZ9 404 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 PXMP2Q9NR77 195 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 TLR9Q9NR96 1032 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 TCP11L1Q9NUJ3 509 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 PLXNA3P51805 1871 aa12.27□□□□□ -0.45
CLDND1-231ENST00000515620 H3BRB1 525 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 RGS20O76081 388 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 FGRP09769 529 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 MYCLP12524 364 aaPredicted RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 UBA1P22314 1058 aaKnown RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 COASYQ13057 564 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 CAMK1Q14012 370 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 BTG3Q14201 252 aaPredicted RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 GPATCH4Q5T3I0 446 aaKnown RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 ASCL5Q7RTU5 278 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 EFHBQ8N7U6 833 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 RNPEPQ9H4A4 650 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 TUT1Q9H6E5 874 aaKnown RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 RC3H2Q9HBD1 1191 aaKnown RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 BARX2Q9UMQ3 279 aaPredicted RBP12.26□□□□□ -0.45
CLDND1-231ENST00000515620 PLAGL2Q9UPG8 496 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
CLDND1-231ENST00000515620 PTPRZ1P23471 2315 aaPredicted RBP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 PRR23AA6NEV1 266 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 GLP2RO95838 553 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 CFBP00751 764 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 PDGFBP01127 241 aaPredicted RBP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 LGALS2P05162 132 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 HSPD1P10809 573 aaKnown RBP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 GHRP10912 638 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 DNAJB1P25685 340 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 NRIP1P48552 1158 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 HNRNPUQ00839 825 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 RBM23Q86U06 439 aaKnown RBP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 MIER1Q8N108 512 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 PI4K2BQ8TCG2 481 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 PHF7Q9BWX1 381 aaPredicted RBP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 PLVAPQ9BX97 442 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 MAF1Q9H063 256 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 CHMP4BQ9H444 224 aaKnown RBP12.25□□□□□ -0.45
CLDND1-231ENST00000515620 SETD4Q9NVD3 440 aa12.25□□□□□ -0.45
CLDND1-231ENST00000515620 PROB1E7EW31 1015 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 DHX16O60231 1041 aaKnown RBP12.24□□□□□ -0.45
CLDND1-231ENST00000515620 ITGB1P05556 798 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 ICAM3P32942 547 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 SP2Q02086 613 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 PTPN21Q16825 1174 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 QRICH1Q2TAL8 776 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 TTC41PQ6P2S7 1318 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 KCNV1Q6PIU1 500 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 ERMP1Q7Z2K6 904 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 ADGRF4Q8IZF3 695 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 PDCD2LQ9BRP1 358 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 MLXIPQ9HAP2 919 aa12.24□□□□□ -0.45
CLDND1-231ENST00000515620 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
CLDND1-231ENST00000515620 MRPL42Q9Y6G3 142 aaKnown RBP12.24□□□□□ -0.45
CLDND1-231ENST00000515620 MYH7BA7E2Y1 1941 aa12.23□□□□□ -0.45
CLDND1-231ENST00000515620 NOP56O00567 594 aaKnown RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms