RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 KCNJ6P48051 423 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 RCAN1P53805 252 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 RTN1Q16799 776 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 CNKSR3Q6P9H4 555 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 RASEFQ8IZ41 740 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 TCEANC2Q96MN5 208 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 GPR20Q99678 358 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 EHMT1Q9H9B1 1298 aa20.08■□□□□ 0.81
DDX41-217ENST00000515562 CHD9Q3L8U1 2897 aa20.08■□□□□ 0.8
DDX41-217ENST00000515562 DOCK5Q9H7D0 1870 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 C17orf102A2RUQ5 167 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 hCG_1984214I3L0E3 225 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 HOXC8P31273 242 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 TRIM71Q2Q1W2 868 aaKnown RBP20.07■□□□□ 0.8
DDX41-217ENST00000515562 ADCK5Q3MIX3 580 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 PPP1R18Q6NYC8 613 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 SERINC5Q86VE9 423 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 ZNF713Q8N859 430 aaPredicted RBP20.07■□□□□ 0.8
DDX41-217ENST00000515562 TET1Q8NFU7 2136 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 BCAS3Q9H6U6 928 aa20.07■□□□□ 0.8
DDX41-217ENST00000515562 EMSYQ7Z589 1322 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 KIF28PB7ZC32 967 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 SMIM10L2AP0DMW4 78 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 SMIM10L2BP0DMW5 78 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 MYOGP15173 224 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 ZNF200P98182 395 aaPredicted RBP20.06■□□□□ 0.8
DDX41-217ENST00000515562 GPNMBQ14956 572 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 UBE2SQ16763 222 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 WWC2Q6AWC2 1192 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 HERC6Q8IVU3 1022 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 ATP6V0A1Q93050 837 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 BRPF3Q9ULD4 1205 aa20.06■□□□□ 0.8
DDX41-217ENST00000515562 KLF18A0A0U1RQI7 1052 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 GOLGA8AA7E2F4 631 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 GOLGA8BA8MQT2 603 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 NBNO60934 754 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 EFCAB14O75071 495 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 CAND2O75155 1236 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 CA3P07451 260 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 GNAT1P11488 350 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 NAPAP54920 295 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 FGD1P98174 961 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 MTMR1Q13613 665 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 HIC1Q14526 733 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 ZNF618Q5T7W0 954 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 WNT8BQ93098 351 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 PCDHA6Q9UN73 950 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 PCDHA8Q9Y5H6 950 aa20.05■□□□□ 0.8
DDX41-217ENST00000515562 ABHD14A-ACY1A0A1B0GW23 586 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 KCNA2P16389 499 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 ITGB5P18084 799 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 THPOP40225 353 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 WDR5P61964 334 aaKnown RBP20.04■□□□□ 0.8
DDX41-217ENST00000515562 SP4Q02446 784 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 FUT2Q10981 343 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 TRAF7Q6Q0C0 670 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 TRIM50Q86XT4 487 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 KCNB2Q92953 911 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 UBIAD1Q9Y5Z9 338 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 PRUNE2Q8WUY3 3088 aa20.04■□□□□ 0.8
DDX41-217ENST00000515562 MAFGO15525 162 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 REC8O95072 547 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 HSPA4P34932 840 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 ADCY7P51828 1080 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 ADGRE1Q14246 886 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 USP38Q8NB14 1042 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 GLT8D2Q9H1C3 349 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 RNPEPQ9H4A4 650 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 RIC8AQ9NPQ8 531 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 PTPRSQ13332 1948 aa20.03■□□□□ 0.8
DDX41-217ENST00000515562 CCDC196A0A1B0GTZ2 297 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 RSPH10B2B2RC85 870 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 TLL1O43897 1013 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 LGR5O75473 907 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 FOSP01100 380 aaPredicted RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 RSPH10BP0C881 870 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 IGFBP4P22692 258 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 TCF7P36402 384 aaPredicted RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 IKBKEQ14164 716 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 MBTPS1Q14703 1052 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 UTP14CQ5TAP6 766 aaKnown RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 JAKMIP1Q96N16 626 aaKnown RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 COL25A1Q9BXS0 654 aaPredicted RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 JADE2Q9NQC1 790 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 BARHL2Q9NY43 387 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 NAP1L2Q9ULW6 460 aaPredicted RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 V9GY48 417 aaPredicted RBP20.02■□□□□ 0.8
DDX41-217ENST00000515562 CHD7Q9P2D1 2997 aa20.02■□□□□ 0.8
DDX41-217ENST00000515562 NID2Q14112 1375 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 STXBP3O00186 592 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 TREHO43280 583 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 ATP9AO75110 1047 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 METAP2P50579 478 aaKnown RBP eCLIP20.01■□□□□ 0.79
DDX41-217ENST00000515562 TYW1BQ6NUM6 668 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 BLOC1S2Q6QNY1 142 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 SEPT1Q8WYJ6 367 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 SETD4Q9NVD3 440 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 MYO9BQ13459 2157 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 NRCAMQ92823 1304 aa20.01■□□□□ 0.79
DDX41-217ENST00000515562 CUL9Q8IWT3 2517 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms