RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 HERVK_113Q902F9 699 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 PRDM12Q9H4Q4 367 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 SLC28A3Q9HAS3 691 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 HELLSQ9NRZ9 838 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 POLR3EQ9NVU0 708 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 MAP10Q9P2G4 905 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 PNMA2Q9UL42 364 aa10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 DDX49Q9Y6V7 483 aaKnown RBP10.46□□□□□ -0.73
CDC42SE2-212ENST00000515533 PTPRSQ13332 1948 aa10.46□□□□□ -0.74
CDC42SE2-212ENST00000515533 GRIN2DO15399 1336 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 UMODL1Q5DID0 1318 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 FRMPD2Q68DX3 1309 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 RAD50Q92878 1312 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 SALL3Q9BXA9 1300 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 LOC102724159A0A0B4J2E5 919 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 ZBBXA8MT70 800 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 CFAP99D6REC4 459 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 NFIBO00712 420 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 F12P00748 615 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 PTGS1P23219 599 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 CALML3P27482 149 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 GRM5P41594 1212 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 NOVP48745 357 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 PSMC6P62333 389 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 BAATQ14032 418 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 PWP2Q15269 919 aaKnown RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 ALX1Q15699 326 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 DUSP28Q4G0W2 176 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 BRDTQ58F21 947 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 TTBK2Q6IQ55 1244 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 MORC4Q8TE76 937 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 TMEM47Q9BQJ4 181 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 NOC4LQ9BVI4 516 aaKnown RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 WDR11Q9BZH6 1224 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 TRPV6Q9H1D0 765 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 BRWD1Q9NSI6 2320 aa10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 BAZ2BQ9UIF8 2168 aaKnown RBP10.45□□□□□ -0.74
CDC42SE2-212ENST00000515533 BDP1A6H8Y1 2624 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 B4DLN1 442 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 FGAP02671 866 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 FGRP09769 529 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 SUPT20HL2P0C7V6 817 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 BMP2P12643 396 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 IGFBP4P22692 258 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 MRPL12P52815 198 aaKnown RBP10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 PDE1AP54750 535 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 PPP2R5BQ15173 497 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 MCMDC2Q4G0Z9 681 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 C4orf48Q5BLP8 95 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 FAM47CQ5HY64 1035 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 AKNAD1Q5T1N1 836 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 TMEM63BQ5T3F8 832 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 BTNL9Q6UXG8 535 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 RNF207Q6ZRF8 634 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 HOMEZQ8IX15 550 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 LINC00528Q8N1L1 170 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 KCTD17Q8N5Z5 321 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 MEIOBQ8N635 442 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 OR6J1Q8NGC5 347 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 SCLYQ96I15 445 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 WNT8AQ9H1J5 351 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 ALDH8A1Q9H2A2 487 aaPredicted RBP10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 NKX2-4Q9H2Z4 354 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 THEGQ9P2T0 379 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 SLC4A7Q9Y6M7 1214 aa10.44□□□□□ -0.74
CDC42SE2-212ENST00000515533 TNKSO95271 1327 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 ZMYM6O95789 1325 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 A0A0D9SFI3 127 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 NKRFO15226 690 aaKnown RBP eCLIP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 PFKMP08237 780 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 MYL3P08590 195 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 HSPD1P10809 573 aaKnown RBP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 PDHBP11177 359 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 PCP11498 1178 aaKnown RBP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 HAND2P61296 217 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 PURAQ00577 322 aaKnown RBP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 PPP2R2DQ66LE6 453 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 SLC30A10Q6XR72 485 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 MFSD6Q6ZSS7 791 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 TICAM2Q86XR7 235 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 SCFD2Q8WU76 684 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 ATXN2LQ8WWM7 1075 aaKnown RBP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 FAM227BQ96M60 508 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 TTC14Q96N46 770 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 MTG1Q9BT17 334 aaPredicted RBP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 PRDM6Q9NQX0 595 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 TCP11L1Q9NUJ3 509 aa10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 TRMT13Q9NUP7 481 aaKnown RBP10.43□□□□□ -0.74
CDC42SE2-212ENST00000515533 CCDC171Q6TFL3 1326 aa10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 WDR19Q8NEZ3 1342 aa10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 UPP2O95045 317 aa10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 CYP2C9P11712 490 aa10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 ACTN1P12814 892 aa10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 MFAP1P55081 439 aaKnown RBP10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 RRP1P56182 461 aaKnown RBP10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 RPS6P62753 249 aaKnown RBP10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 CCDC85BQ15834 202 aaPredicted RBP10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 USH1GQ495M9 461 aa10.42□□□□□ -0.74
CDC42SE2-212ENST00000515533 GPATCH4Q5T3I0 446 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms