RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CHST13Q8NET6 341 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 NSUN6Q8TEA1 469 aaKnown RBP10.25□□□□□ -0.77
CPNE4-213ENST00000515418 BRI3BPQ8WY22 251 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 C7orf25Q9BPX7 421 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 TRIM5Q9C035 493 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 JADE2Q9NQC1 790 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 ASTN1O14525 1302 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 FRMPD4Q14CM0 1322 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 PDHXO00330 501 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 RGS20O76081 388 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 PGK2P07205 417 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 ATP1A3P13637 1013 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 RPA1P27694 616 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 ASIC1P78348 528 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 RAD51AP2Q09MP3 1159 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 HYIQ5T013 277 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 CHADLQ6NUI6 762 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 TPH2Q8IWU9 490 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 DYDC2Q96IM9 177 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 HSD17B14Q9BPX1 270 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 AGO4Q9HCK5 861 aaKnown RBP10.25□□□□□ -0.77
CPNE4-213ENST00000515418 POLD4Q9HCU8 107 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 FANCLQ9NW38 375 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 STK17AQ9UEE5 414 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 RABGAP1Q9Y3P9 1069 aa10.25□□□□□ -0.77
CPNE4-213ENST00000515418 LCTP09848 1927 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 ZNFX1Q9P2E3 1918 aaKnown RBP10.24□□□□□ -0.77
CPNE4-213ENST00000515418 SMTNL1A8MU46 457 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 SORBS3O60504 671 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 PLA2G4BP0C869 781 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 BCRP11274 1271 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 CETPP11597 493 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 FCER1AP12319 257 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 CCND2P30279 289 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 GTF2A2P52657 109 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 HUNKP57058 714 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 FKBP1BP68106 108 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 SETQ01105 290 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-213ENST00000515418 AMPD3Q01432 767 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 PABPC4Q13310 644 aaKnown RBP eCLIP10.24□□□□□ -0.77
CPNE4-213ENST00000515418 PPP2R5CQ13362 524 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 SPRYD7Q5W111 196 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 ERMNQ8TAM6 284 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 PIGOQ8TEQ8 1089 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 DDX12PQ92771 950 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 PTPN18Q99952 460 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 NT5C3AQ9H0P0 336 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 WRAP73Q9P2S5 460 aaPredicted RBP10.24□□□□□ -0.77
CPNE4-213ENST00000515418 TELO2Q9Y4R8 837 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 DOCK5Q9H7D0 1870 aa10.24□□□□□ -0.77
CPNE4-213ENST00000515418 UNCXA6NJT0 531 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 IDEP14735 1019 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 PRCPP42785 496 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 MYL5Q02045 173 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 PDE4DQ08499 809 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 STK4Q13043 487 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 SEMA3FQ13275 785 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 ARSHQ5FYA8 562 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 ZNF658Q5TYW1 1059 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-213ENST00000515418 WDR78Q5VTH9 848 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 HAUS3Q68CZ6 603 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 B3GNT9Q6UX72 402 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 TRMT1LQ7Z2T5 733 aaKnown RBP10.23□□□□□ -0.77
CPNE4-213ENST00000515418 FAM43AQ8N2R8 423 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 SPC24Q8NBT2 197 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 TEKT3Q9BXF9 490 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 PORCNQ9H237 461 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 MAGEF1Q9HAY2 307 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 DNM3Q9UQ16 869 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 SOWAHBA6NEL2 793 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 IKBKBO14920 756 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 RHOBTB3O94955 611 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 MYL1P05976 194 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 ZNF75DP51815 510 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 NIPA1Q7RTP0 329 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 ANKRD13CQ8N6S4 541 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 BANK1Q8NDB2 785 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 SMCR8Q8TEV9 937 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-213ENST00000515418 DNAJC19Q96DA6 116 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 RIT2Q99578 217 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 POLR3CQ9BUI4 534 aaPredicted RBP10.23□□□□□ -0.77
CPNE4-213ENST00000515418 EFCC1Q9HA90 598 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 SAMSN1Q9NSI8 373 aaKnown RBP10.23□□□□□ -0.77
CPNE4-213ENST00000515418 RMND1Q9NWS8 449 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 CTNND2Q9UQB3 1225 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 NFE2L3Q9Y4A8 694 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 A0A0G2JMZ2 1700 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 KDM3AQ9Y4C1 1321 aa10.23□□□□□ -0.77
CPNE4-213ENST00000515418 CENPFP49454 3210 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 POTEB2H3BUK9 544 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 ECM2O94769 699 aaPredicted RBP10.22□□□□□ -0.77
CPNE4-213ENST00000515418 ZNF157P51786 506 aaPredicted RBP10.22□□□□□ -0.77
CPNE4-213ENST00000515418 SLC12A3P55017 1021 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 ERVK-9P63128 1117 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 ERVK-24P63145 666 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 KCNB1Q14721 858 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 MIER3Q7Z3K6 550 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 GPBP1Q86WP2 473 aa10.22□□□□□ -0.77
CPNE4-213ENST00000515418 GIMAP8Q8ND71 665 aaPredicted RBP10.22□□□□□ -0.77
CPNE4-213ENST00000515418 ENOX1Q8TC92 643 aaKnown RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms