RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 CPA1P15085 419 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 ATP2A2P16615 1042 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 CDC27P30260 824 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 GPNMBQ14956 572 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 TYW1BQ6NUM6 668 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 TRAF7Q6Q0C0 670 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 NLRX1Q86UT6 975 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 ZNF713Q8N859 430 aaPredicted RBP12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 WNT8BQ93098 351 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 JAKMIP1Q96N16 626 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 PCDHA11Q9Y5I1 949 aa12.01□□□□□ -0.49
HMGXB3-205ENST00000514469 SPTBN5Q9NRC6 3674 aaKnown RBP12□□□□□ -0.49
HMGXB3-205ENST00000514469 A0A0C4DFX4 3053 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 GBF1Q92538 1859 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 SPDYE3A6NKU9 549 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 STXBP3O00186 592 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 BAIAP3O94812 1187 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 REC8O95072 547 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 PARNO95453 639 aaKnown RBP12□□□□□ -0.49
HMGXB3-205ENST00000514469 CXCL10P02778 98 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 SMIM10L2AP0DMW4 78 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 SMIM10L2BP0DMW5 78 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 KCNA2P16389 499 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 ITGB5P18084 799 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 METAP2P50579 478 aaKnown RBP eCLIP12□□□□□ -0.49
HMGXB3-205ENST00000514469 RABGGTBP53611 331 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 NAPAP54920 295 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 ZNF200P98182 395 aaPredicted RBP12□□□□□ -0.49
HMGXB3-205ENST00000514469 SERINC5Q86VE9 423 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 FBXL16Q8N461 479 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 GIMAP8Q8ND71 665 aaPredicted RBP12□□□□□ -0.49
HMGXB3-205ENST00000514469 CDHR1Q96JP9 859 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 SLC9A7Q96T83 725 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 USP26Q9BXU7 913 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 FTOQ9C0B1 505 aaKnown RBP eCLIP12□□□□□ -0.49
HMGXB3-205ENST00000514469 NKX2-4Q9H2Z4 354 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 RIC8AQ9NPQ8 531 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 PCDHA6Q9UN73 950 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 TELO2Q9Y4R8 837 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 PCDHA8Q9Y5H6 950 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 UBIAD1Q9Y5Z9 338 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 TRANK1O15050 2925 aa12□□□□□ -0.49
HMGXB3-205ENST00000514469 C17orf102A2RUQ5 167 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 EPB41L2O43491 1005 aaKnown RBP11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 NBNO60934 754 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 ATP9AO75110 1047 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 RPS6KB1P23443 525 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 CLK2P49760 499 aaKnown RBP11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 APOBRQ0VD83 1088 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 MTMR1Q13613 665 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 ZNF618Q5T7W0 954 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 BLOC1S2Q6QNY1 142 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 Q6ZUG5 572 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 TRIM50Q86XT4 487 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 PHOSPHO2Q8TCD6 241 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 BRF1Q92994 677 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 AGXT2Q9BYV1 514 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 EHMT1Q9H9B1 1298 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 SLC28A3Q9HAS3 691 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 BARHL2Q9NY43 387 aa11.99□□□□□ -0.49
HMGXB3-205ENST00000514469 MYH7BA7E2Y1 1941 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 NEFLP07196 543 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 MYOGP15173 224 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 ADCY7P51828 1080 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 WDR5P61964 334 aaKnown RBP11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 FGD1P98174 961 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 AP3B2Q13367 1082 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 MBTPS1Q14703 1052 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 TCTN1Q2MV58 587 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 PPP2R2DQ66LE6 453 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 CNKSR3Q6P9H4 555 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 PRDM12Q9H4Q4 367 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 JADE2Q9NQC1 790 aa11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 ZNF215Q9UL58 517 aaPredicted RBP11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 V9GY48 417 aaPredicted RBP11.98□□□□□ -0.49
HMGXB3-205ENST00000514469 DOCK5Q9H7D0 1870 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 EMSYQ7Z589 1322 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 CCDC196A0A1B0GTZ2 297 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 SMCO2A6NFE2 343 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 MAFGO15525 162 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 TREHO43280 583 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 CAND2O75155 1236 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 FOSP01100 380 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 CA3P07451 260 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 ADD1P35611 737 aaKnown RBP11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 TCF7P36402 384 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 ADAM17P78536 824 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 SP4Q02446 784 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 PFKFB3Q16875 520 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 UTP14CQ5TAP6 766 aaKnown RBP11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 HERC6Q8IVU3 1022 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 PGBD1Q96JS3 809 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 GAS2L1Q99501 681 aaPredicted RBP11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 ANO3Q9BYT9 981 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 GLT8D2Q9H1C3 349 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 RNPEPQ9H4A4 650 aa11.97□□□□□ -0.49
HMGXB3-205ENST00000514469 NAP1L2Q9ULW6 460 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms