RNA–Protein interactions for RNA: ENST00000513997.1

DDX60-205, Transcript of DExD/H-box helicase 60, humanhuman

TSL 3

Gene DDX60, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX60-205ENST00000513997 CORO1BQ9BR76 489 aa10.11□□□□□ -0.79
DDX60-205ENST00000513997 GTPBP4Q9BZE4 634 aaKnown RBP10.11□□□□□ -0.79
DDX60-205ENST00000513997 TMEM60Q9H2L4 133 aa10.11□□□□□ -0.79
DDX60-205ENST00000513997 GP6Q9HCN6 339 aa10.11□□□□□ -0.79
DDX60-205ENST00000513997 RTEL1Q9NZ71 1219 aa10.11□□□□□ -0.79
DDX60-205ENST00000513997 TPCN1Q9ULQ1 816 aa10.11□□□□□ -0.79
DDX60-205ENST00000513997 COQ6Q9Y2Z9 468 aa10.11□□□□□ -0.79
DDX60-205ENST00000513997 ITIH6Q6UXX5 1313 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 FAM177BA6PVY3 158 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 FAM227AF5H4B4 570 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 SHOXO15266 292 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 NCAM2O15394 837 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 TUSC2O75896 110 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 CYP11A1P05108 521 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 CKMP06732 381 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 HNRNPUQ00839 825 aaKnown RBP eCLIP10.1□□□□□ -0.79
DDX60-205ENST00000513997 RING1Q06587 406 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 WDR45BQ5MNZ6 344 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 TSHZ3Q63HK5 1081 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 SLC6A19Q695T7 634 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 ZC3H7AQ8IWR0 971 aaKnown RBP10.1□□□□□ -0.79
DDX60-205ENST00000513997 MRPL41Q8IXM3 137 aaKnown RBP10.1□□□□□ -0.79
DDX60-205ENST00000513997 C7orf61Q8IZ16 206 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 NSUN6Q8TEA1 469 aaKnown RBP10.1□□□□□ -0.79
DDX60-205ENST00000513997 MKRN2Q9H000 416 aaKnown RBP10.1□□□□□ -0.79
DDX60-205ENST00000513997 H2AFY2Q9P0M6 372 aaPredicted RBP10.1□□□□□ -0.79
DDX60-205ENST00000513997 CSADQ9Y600 493 aa10.1□□□□□ -0.79
DDX60-205ENST00000513997 K7ENM7 598 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 MBD4O95243 580 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 POU2F2P09086 479 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 CAPN3P20807 821 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 ECI1P42126 302 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 CABP4P57796 275 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 POU4F3Q15319 338 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 KIF4BQ2VIQ3 1234 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 CREB3L3Q68CJ9 461 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 DENND5AQ6IQ26 1287 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 DARS2Q6PI48 645 aaKnown RBP10.09□□□□□ -0.79
DDX60-205ENST00000513997 DPP9Q86TI2 863 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 DMRTC2Q8IXT2 367 aaPredicted RBP10.09□□□□□ -0.79
DDX60-205ENST00000513997 GRAMD1CQ8IYS0 662 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 EFHBQ8N7U6 833 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 PPP1R35Q8TAP8 253 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 BAHD1Q8TBE0 780 aaPredicted RBP10.09□□□□□ -0.79
DDX60-205ENST00000513997 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.09□□□□□ -0.79
DDX60-205ENST00000513997 LMBR1Q8WVP7 490 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 JADE3Q92613 823 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 TRIM11Q96F44 468 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 APOL5Q9BWW9 433 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 CELF4Q9BZC1 486 aaKnown RBP10.09□□□□□ -0.79
DDX60-205ENST00000513997 NRSN2Q9GZP1 204 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 VPS11Q9H270 941 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 BHMT2Q9H2M3 363 aa10.09□□□□□ -0.79
DDX60-205ENST00000513997 PTPDC1A2A3K4 754 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 LINC01387J3KSC0 135 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 TGM5O43548 720 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 EIF4EBP3O60516 100 aaPredicted RBP10.08□□□□□ -0.8
DDX60-205ENST00000513997 CDC25BP30305 580 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 PPM1AP35813 382 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 ZC3H12AQ5D1E8 599 aaKnown RBP10.08□□□□□ -0.8
DDX60-205ENST00000513997 ANKRD18AQ8IVF6 992 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 OR8H2Q8N162 312 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 KRT78Q8N1N4 520 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 MIER2Q8N344 545 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 TMEM169Q96HH4 297 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 MAP3K14Q99558 947 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 ZFYVE21Q9BQ24 234 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 TOPORSQ9NS56 1045 aaPredicted RBP10.08□□□□□ -0.8
DDX60-205ENST00000513997 OXSMQ9NWU1 459 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 GPRC5BQ9NZH0 403 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 MKL2Q9ULH7 1088 aa10.08□□□□□ -0.8
DDX60-205ENST00000513997 CNTNAP5Q8WYK1 1306 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 BICDL2A1A5D9 508 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 GOLGA8AA7E2F4 631 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 GOLGA8BA8MQT2 603 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 GNB5O14775 395 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 RPN1P04843 607 aaKnown RBP10.07□□□□□ -0.8
DDX60-205ENST00000513997 PYGLP06737 847 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 ADKP55263 362 aaKnown RBP10.07□□□□□ -0.8
DDX60-205ENST00000513997 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
DDX60-205ENST00000513997 ARMC3Q5W041 872 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 TXNDC11Q6PKC3 985 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 CYP26C1Q6V0L0 522 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 WDR89Q96FK6 387 aaPredicted RBP10.07□□□□□ -0.8
DDX60-205ENST00000513997 ALG13Q9NP73 1137 aaKnown RBP10.07□□□□□ -0.8
DDX60-205ENST00000513997 CCM2LQ9NUG4 571 aaPredicted RBP10.07□□□□□ -0.8
DDX60-205ENST00000513997 HIF3AQ9Y2N7 669 aa10.07□□□□□ -0.8
DDX60-205ENST00000513997 H3BML4 177 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 GOLIM4O00461 696 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 YBX3P16989 372 aaKnown RBP eCLIP10.06□□□□□ -0.8
DDX60-205ENST00000513997 PRIM2P49643 509 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 GPR85P60893 370 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 MPP1Q00013 466 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 CYP4F3Q08477 520 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 AUHQ13825 339 aaKnown RBP10.06□□□□□ -0.8
DDX60-205ENST00000513997 PDE3AQ14432 1141 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 TRAPPC3LQ5T215 181 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 RETSATQ6NUM9 610 aa10.06□□□□□ -0.8
DDX60-205ENST00000513997 SYDE1Q6ZW31 735 aaPredicted RBP10.06□□□□□ -0.8
DDX60-205ENST00000513997 TBC1D1Q86TI0 1168 aaPredicted RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms