RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 C11orf49Q9H6J7 331 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 KCNH7Q9NS40 1196 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 TBC1D22BQ9NU19 505 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 POLR3EQ9NVU0 708 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
NEDD9-214ENST00000513989 FAM184BQ9ULE4 1060 aa11.48□□□□□ -0.57
NEDD9-214ENST00000513989 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
NEDD9-214ENST00000513989 FAM205CA6NFA0 338 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 IPO5O00410 1097 aaKnown RBP11.47□□□□□ -0.57
NEDD9-214ENST00000513989 NKRFO15226 690 aaKnown RBP eCLIP11.47□□□□□ -0.57
NEDD9-214ENST00000513989 TDP2O95551 362 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 YEATS4O95619 227 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 SYN1P17600 705 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 ICAM3P32942 547 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 CYP2C19P33261 490 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 DNM1Q05193 864 aaKnown RBP11.47□□□□□ -0.57
NEDD9-214ENST00000513989 PTGDRQ13258 359 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 TMEM266Q2M3C6 531 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 ARL6IP4Q66PJ3 421 aaKnown RBP11.47□□□□□ -0.57
NEDD9-214ENST00000513989 DTHD1Q6ZMT9 781 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 EEPD1Q7L9B9 569 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 TRPV1Q8NER1 839 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 CYP2W1Q8TAV3 490 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 KCNG4Q8TDN1 519 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 FGD4Q96M96 766 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 GBP4Q96PP9 640 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.47□□□□□ -0.57
NEDD9-214ENST00000513989 ZHX1Q9UKY1 873 aaPredicted RBP11.47□□□□□ -0.57
NEDD9-214ENST00000513989 PCDHA12Q9UN75 941 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 PCDHB6Q9Y5E3 794 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 STK24Q9Y6E0 443 aa11.47□□□□□ -0.57
NEDD9-214ENST00000513989 VCANP13611 3396 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 ASTN1O14525 1302 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 GOLGA6L22H0YM25 854 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 SPTLC2O15270 562 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 GAS7O60861 476 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 OR52Z1P0C646 297 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 TXNP10599 105 aaKnown RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 CNGA1P29973 690 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 BMP8BP34820 402 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 PRPHP41219 470 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 TXKP42681 527 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 MAGEA10P43363 369 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 TNFAIP2Q03169 654 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 LAMC2Q13753 1193 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 SLC39A14Q15043 492 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 LRRC26Q2I0M4 334 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 BRDTQ58F21 947 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 FAM173BQ6P4H8 233 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 FBXO16Q8IX29 292 aaPredicted RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 TNPO1Q92973 898 aaKnown RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 FERMT2Q96AC1 680 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 SPATA32Q96LK8 384 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 USP28Q96RU2 1077 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 RIT2Q99578 217 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 MLXIPQ9HAP2 919 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 SPC25Q9HBM1 224 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 AGO4Q9HCK5 861 aaKnown RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 DDX41Q9UJV9 622 aaKnown RBP11.46□□□□□ -0.57
NEDD9-214ENST00000513989 RCOR1Q9UKL0 485 aa11.46□□□□□ -0.57
NEDD9-214ENST00000513989 PRUNE2Q8WUY3 3088 aa11.46□□□□□ -0.58
NEDD9-214ENST00000513989 IGLV3-22A0A075B6J6 115 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 RBM47A0AV96 593 aaKnown RBP11.45□□□□□ -0.58
NEDD9-214ENST00000513989 GOLGA6L4A6NEF3 574 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 MSH4O15457 936 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 SEPT4O43236 478 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 EDIL3O43854 480 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 PPP6R2O75170 966 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 ARP10275 920 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 AKR1A1P14550 325 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 ME1P48163 572 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 NASPP49321 788 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-214ENST00000513989 PDIA5Q14554 519 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 NBR1Q14596 966 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 CCDC144BQ3MJ40 725 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 DUSP28Q4G0W2 176 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 PRAMEF19Q5SWL8 479 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 TAPT1Q6NXT6 567 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 DHX37Q8IY37 1157 aaKnown RBP11.45□□□□□ -0.58
NEDD9-214ENST00000513989 LINC00301Q8NCQ3 95 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 ZFP91Q96JP5 570 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-214ENST00000513989 MTMR9Q96QG7 549 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 TEKT3Q9BXF9 490 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 AP5M1Q9H0R1 490 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 KCNMB3Q9NPA1 279 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 Q9Y3F1 56 aa11.45□□□□□ -0.58
NEDD9-214ENST00000513989 MORC2Q9Y6X9 1032 aaPredicted RBP11.45□□□□□ -0.58
NEDD9-214ENST00000513989 NFASCO94856 1347 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 NOP56O00567 594 aaKnown RBP11.44□□□□□ -0.58
NEDD9-214ENST00000513989 SLC37A4O43826 429 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 MSCO60682 206 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 RGS20O76081 388 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 GH1P01241 217 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 ZNF865P0CJ78 1059 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-214ENST00000513989 RARBP10826 455 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 CYBAP13498 195 aa11.44□□□□□ -0.58
NEDD9-214ENST00000513989 ATP2C1P98194 919 aaPredicted RBP11.44□□□□□ -0.58
NEDD9-214ENST00000513989 KRT76Q01546 638 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms