RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 RWDD2AQ9UIY3 292 aa14.37□□□□□ -0.11
PVT1-203ENST00000513868 STK24Q9Y6E0 443 aa14.37□□□□□ -0.11
PVT1-203ENST00000513868 SYNRGQ9UMZ2 1314 aa14.37□□□□□ -0.11
PVT1-203ENST00000513868 LRRC37A2A6NM11 1700 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 GAS7O60861 476 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 PTMAP06454 111 aaKnown RBP14.36□□□□□ -0.11
PVT1-203ENST00000513868 PLA2G4BP0C869 781 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 SLC12A3P55017 1021 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 PDE4DQ08499 809 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 STK4Q13043 487 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 PLS1Q14651 629 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 GPAT2Q6NUI2 795 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 DYMQ7RTS9 669 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 MB21D1Q8N884 522 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 DDX12PQ92771 950 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 RIT2Q99578 217 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 ASCC2Q9H1I8 757 aaPredicted RBP14.36□□□□□ -0.11
PVT1-203ENST00000513868 UNC45AQ9H3U1 944 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 RRAGCQ9HB90 399 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 AGO4Q9HCK5 861 aaKnown RBP14.36□□□□□ -0.11
PVT1-203ENST00000513868 RGL1Q9NZL6 768 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 AGTPBP1Q9UPW5 1226 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 CTNND2Q9UQB3 1225 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 MAPK8IP1Q9UQF2 711 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 CNMDO75829 334 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 SLITRK3O94933 977 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 FCER1AP12319 257 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 ITGB3BPQ13352 177 aaPredicted RBP14.36□□□□□ -0.11
PVT1-203ENST00000513868 ARHGEF16Q5VV41 709 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 CDKAL1Q5VV42 579 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 VSIG10LQ86VR7 867 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 RIOX2Q8IUF8 465 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 NELFBQ8WX92 580 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 HPS3Q969F9 1004 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 NAP1L5Q96NT1 182 aaPredicted RBP14.36□□□□□ -0.11
PVT1-203ENST00000513868 LRRC27Q9C0I9 530 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 EXOC1Q9NV70 894 aa14.36□□□□□ -0.11
PVT1-203ENST00000513868 UNCXA6NJT0 531 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 ESPNB1AK53 854 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 COBLO75128 1261 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 MYCLP12524 364 aaPredicted RBP14.35□□□□□ -0.11
PVT1-203ENST00000513868 CYP11B2P19099 503 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 HERVK_113P62684 666 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 CYP4A11Q02928 519 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 PAK1Q13153 545 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 CCDC144BQ3MJ40 725 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 COBLL1Q53SF7 1204 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 HSP90AA4PQ58FG1 418 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 ARSHQ5FYA8 562 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 XRRA1Q6P2D8 792 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 APTXQ7Z2E3 356 aaKnown RBP14.35□□□□□ -0.11
PVT1-203ENST00000513868 ZSCAN30Q86W11 494 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 CHST13Q8NET6 341 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 ZNF830Q96NB3 372 aaPredicted RBP14.35□□□□□ -0.11
PVT1-203ENST00000513868 TEKT3Q9BXF9 490 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 TUFT1Q9NNX1 390 aa14.35□□□□□ -0.11
PVT1-203ENST00000513868 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.35□□□□□ -0.113e-8■□□□□ 9.9
PVT1-203ENST00000513868 CHMP2AO43633 222 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 NR3C2P08235 984 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 PMS1P54277 932 aaKnown RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 IRX3P78415 501 aaPredicted RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 MTMR1Q13613 665 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 CTTNQ14247 550 aaKnown RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 KCTD17Q8N5Z5 321 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 SYT2Q8N9I0 419 aaPredicted RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 CCDC47Q96A33 483 aaKnown RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 SLC10A4Q96EP9 437 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 DYDC2Q96IM9 177 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 SPATC1LQ9H0A9 340 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 INTS13Q9NVM9 706 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 WRAP73Q9P2S5 460 aaPredicted RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 ZKSCAN5Q9Y2L8 839 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 MCM3APO60318 1980 aa14.34□□□□□ -0.11
PVT1-203ENST00000513868 MYH9P35579 1960 aaKnown RBP14.34□□□□□ -0.11
PVT1-203ENST00000513868 ASTN1O14525 1302 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 ATP9AO75110 1047 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 RGS20O76081 388 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 CCND2P30279 289 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 UBASH3AP57075 661 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 PABPC4Q13310 644 aaKnown RBP eCLIP14.33□□□□□ -0.111e-6■■■□□ 18.3
PVT1-203ENST00000513868 EPHA7Q15375 998 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 FASTKD5Q7L8L6 764 aaKnown RBP14.33□□□□□ -0.11
PVT1-203ENST00000513868 CCDC186Q7Z3E2 898 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 GPBP1Q86WP2 473 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 DRC7Q8IY82 874 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 NSUN6Q8TEA1 469 aaKnown RBP14.33□□□□□ -0.11
PVT1-203ENST00000513868 DHTKD1Q96HY7 919 aaPredicted RBP14.33□□□□□ -0.11
PVT1-203ENST00000513868 GTPBP4Q9BZE4 634 aaKnown RBP14.33□□□□□ -0.11
PVT1-203ENST00000513868 KCNF1Q9H3M0 494 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 R3HDMLQ9H3Y0 253 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 ZNF408Q9H9D4 720 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 RRAGDQ9NQL2 400 aaPredicted RBP14.33□□□□□ -0.11
PVT1-203ENST00000513868 RBPJLQ9UBG7 517 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 DNM3Q9UQ16 869 aa14.33□□□□□ -0.11
PVT1-203ENST00000513868 NPHP3-ACAD11A0A0J9YXS1 232 aa14.33□□□□□ -0.12
PVT1-203ENST00000513868 FRMD3A2A2Y4 597 aa14.33□□□□□ -0.12
PVT1-203ENST00000513868 TRIM49BA6NDI0 452 aa14.33□□□□□ -0.12
PVT1-203ENST00000513868 GOLGA6L6A8MZA4 724 aa14.33□□□□□ -0.12
PVT1-203ENST00000513868 SERPINC1P01008 464 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms