RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 ANKZF1Q9H8Y5 726 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ADGRL3Q9HAR2 1447 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 LUC7L3O95232 432 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ATF7P17544 494 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PDE6BP35913 854 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 PPP2R2AP63151 447 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 FAM83BQ5T0W9 1011 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 FOXR1Q6PIV2 292 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 RSRC2Q7L4I2 434 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 SPATA24Q86W54 205 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ZNF473Q8WTR7 871 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 CCT8L2Q96SF2 557 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 EHD2Q9NZN4 543 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ZC3H13Q5T200 1668 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ANKARQ7Z5J8 1434 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 GAS7O60861 476 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 CD44P16070 742 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 RFX5P48382 616 aaPredicted RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ARHGAP24Q8N264 748 aa8.44□□□□□ -1.06
CLCN3-209ENST00000513761 RBM12Q9NTZ6 932 aaKnown RBP8.44□□□□□ -1.06
CLCN3-209ENST00000513761 ITIH6Q6UXX5 1313 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 MECOMQ03112 1051 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 MYO1EQ12965 1108 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ZNF449Q6P9G9 518 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 CTAGE3PQ8IX95 158 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 FAM186BQ8IYM0 893 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 OR2W6PQ8NHA6 318 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 SREK1Q8WXA9 508 aaKnown RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 TAF1DQ9H5J8 278 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 PRPF6O94906 941 aaKnown RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 MYL7Q01449 175 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 TMED2Q15363 201 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 CXorf56Q9H5V9 222 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 HAUS2Q9NVX0 235 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 FBXL5Q9UKA1 691 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 PCDHA1Q9Y5I3 950 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 KIAA1210Q9ULL0 1709 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 K7ENM7 598 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 PLA2G4BP0C869 781 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 EIF3BP55884 814 aaKnown RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 IL9RQ01113 521 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 UNC13DQ70J99 1090 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 PHLDB2Q86SQ0 1253 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 EPN3Q9H201 632 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 CEP72Q9P209 647 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 GGT7Q9UJ14 662 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 NCAPD2Q15021 1401 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ADGRB2O60241 1585 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 I3L4J1 428 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 PSMD14O00487 310 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 HNRNPH1P31943 449 aaKnown RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ZNF211Q13398 564 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 DIXDC1Q155Q3 683 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 KCTD1Q719H9 257 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 MAIP1Q8WWC4 291 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ZIM3Q96PE6 472 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 DUSP10Q9Y6W6 482 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ADGRB1O14514 1584 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 CHD1O14646 1710 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 PPP1R3GB7ZBB8 358 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 LSP1P33241 339 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 MDH1P40925 334 aaKnown RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 CARSP49589 748 aaKnown RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 HSPA2P54652 639 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 GTF2IP78347 998 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 SGO2Q562F6 1265 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ILDR1Q86SU0 546 aaPredicted RBP8.43□□□□□ -1.06
CLCN3-209ENST00000513761 SLFN12Q8IYM2 578 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 CCDC89Q8N998 374 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 KCNV2Q8TDN2 545 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 AMACRQ9UHK6 382 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 HPSEQ9Y251 543 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 RABGAP1Q9Y3P9 1069 aa8.43□□□□□ -1.06
CLCN3-209ENST00000513761 ALX1Q15699 326 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 SCYL3Q8IZE3 742 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ADSSL1Q8N142 457 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 MSANTD4Q8NCY6 345 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 FERMT1Q9BQL6 677 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 AZI2Q9H6S1 392 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ARHGAP42A6NI28 874 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 DAPK3O43293 454 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 LRRC14Q15048 493 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 CCDC93Q567U6 631 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ODR4Q5SWX8 454 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 RASIP1Q5U651 963 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 SUSD4Q5VX71 490 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 PALM2Q8IXS6 379 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 SRBD1Q8N5C6 995 aaKnown RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 CFAP61Q8NHU2 1237 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 GRK7Q8WTQ7 553 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 TYW1Q9NV66 732 aaKnown RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 NOP53Q9NZM5 478 aaKnown RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ZNF148Q9UQR1 794 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 THRAP3Q9Y2W1 955 aaKnown RBP8.42□□□□□ -1.06
CLCN3-209ENST00000513761 H0Y3Z8 333 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 CCDC188H7C350 402 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 ECEL1O95672 775 aa8.42□□□□□ -1.06
CLCN3-209ENST00000513761 DLATP10515 647 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms