RNA–Protein interactions for RNA: ENST00000513287.5

CLDND1-226, Transcript of claudin domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDND1, Length 999 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-226ENST00000513287 LGALS2P05162 132 aa29.12■■■□□ 2.25
CLDND1-226ENST00000513287 ZNF200P98182 395 aaPredicted RBP29.12■■■□□ 2.25
CLDND1-226ENST00000513287 PCNX4Q63HM2 1172 aa29.12■■■□□ 2.25
CLDND1-226ENST00000513287 CTCFLQ8NI51 663 aaPredicted RBP29.12■■■□□ 2.25
CLDND1-226ENST00000513287 GPKOWQ92917 476 aaPredicted RBP eCLIP29.12■■■□□ 2.25
CLDND1-226ENST00000513287 RRP36Q96EU6 259 aaKnown RBP29.12■■■□□ 2.25
CLDND1-226ENST00000513287 RSPH10B2B2RC85 870 aa29.11■■■□□ 2.25
CLDND1-226ENST00000513287 RSPH10BP0C881 870 aa29.11■■■□□ 2.25
CLDND1-226ENST00000513287 ERVK-21P61565 698 aa29.11■■■□□ 2.25
CLDND1-226ENST00000513287 GRB10Q13322 594 aa29.11■■■□□ 2.25
CLDND1-226ENST00000513287 ZNF654Q8IZM8 581 aa29.11■■■□□ 2.25
CLDND1-226ENST00000513287 TMEM87BQ96K49 555 aa29.11■■■□□ 2.25
CLDND1-226ENST00000513287 RBM8AQ9Y5S9 174 aaKnown RBP29.11■■■□□ 2.25
CLDND1-226ENST00000513287 GNAT1P11488 350 aa29.1■■■□□ 2.25
CLDND1-226ENST00000513287 TCTN1Q2MV58 587 aa29.1■■■□□ 2.25
CLDND1-226ENST00000513287 MICALL1Q8N3F8 863 aa29.1■■■□□ 2.25
CLDND1-226ENST00000513287 GIMAP8Q8ND71 665 aaPredicted RBP29.1■■■□□ 2.25
CLDND1-226ENST00000513287 CUL5Q93034 780 aa29.1■■■□□ 2.25
CLDND1-226ENST00000513287 ATP6V0A1Q93050 837 aa29.1■■■□□ 2.25
CLDND1-226ENST00000513287 RNPEPQ9H4A4 650 aa29.1■■■□□ 2.25
CLDND1-226ENST00000513287 NOP56O00567 594 aaKnown RBP29.09■■■□□ 2.25
CLDND1-226ENST00000513287 MEIS2O14770 477 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 LIFRP42702 1097 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 SEMA3FQ13275 785 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 PLEKHG4Q58EX7 1191 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 CASC1Q6TDU7 716 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 TGS1Q96RS0 853 aaKnown RBP29.09■■■□□ 2.25
CLDND1-226ENST00000513287 GPR20Q99678 358 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 INSL6Q9Y581 213 aa29.09■■■□□ 2.25
CLDND1-226ENST00000513287 LCHNA4D1U4 455 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 SMIM10L2AP0DMW4 78 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 SMIM10L2BP0DMW5 78 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 MCM5P33992 734 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 THPOP40225 353 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 SMARCC2Q8TAQ2 1214 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 BCAS3Q9H6U6 928 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 SEC63Q9UGP8 760 aaKnown RBP29.08■■■□□ 2.25
CLDND1-226ENST00000513287 MICAL3Q7RTP6 2002 aa29.08■■■□□ 2.25
CLDND1-226ENST00000513287 BDP1A6H8Y1 2624 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 CALM1P0DP23 149 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 CALM2P0DP24 149 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 CALM3P0DP25 149 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 ADAM17P78536 824 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 CYFIP1Q7L576 1253 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 DBF4BQ8NFT6 615 aa29.07■■■□□ 2.24
CLDND1-226ENST00000513287 ZFP91Q96JP5 570 aaPredicted RBP29.07■■■□□ 2.24
CLDND1-226ENST00000513287 ZNF215Q9UL58 517 aaPredicted RBP29.07■■■□□ 2.24
CLDND1-226ENST00000513287 LINC01553A4QN01 128 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 HTRA4P83105 476 aaPredicted RBP29.06■■■□□ 2.24
CLDND1-226ENST00000513287 TFF2Q03403 129 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 SKIV2LQ15477 1246 aaKnown RBP29.06■■■□□ 2.24
CLDND1-226ENST00000513287 NLRX1Q86UT6 975 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 TEX2Q8IWB9 1127 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 HLA-CQ95604 372 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 CDHR1Q96JP9 859 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 SUGCTQ9HAC7 445 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 SIP14410 1827 aa29.06■■■□□ 2.24
CLDND1-226ENST00000513287 TREHO43280 583 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 PRC1O43663 620 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 SORBS3O60504 671 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 AMHP03971 560 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 USP17L6PQ6QN14 398 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 TMCO2Q7Z6W1 182 aaPredicted RBP29.05■■■□□ 2.24
CLDND1-226ENST00000513287 RPAINQ86UA6 219 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 SP7Q8TDD2 431 aaPredicted RBP29.05■■■□□ 2.24
CLDND1-226ENST00000513287 GPRASP2Q96D09 838 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 LSG1Q9H089 658 aaKnown RBP29.05■■■□□ 2.24
CLDND1-226ENST00000513287 RTEL1Q9NZ71 1219 aa29.05■■■□□ 2.24
CLDND1-226ENST00000513287 TCF20Q9UGU0 1960 aaKnown RBP29.04■■■□□ 2.24
CLDND1-226ENST00000513287 SH2B2O14492 632 aaPredicted RBP29.04■■■□□ 2.24
CLDND1-226ENST00000513287 FAM26DQ5JW98 314 aa29.04■■■□□ 2.24
CLDND1-226ENST00000513287 KRT40Q6A162 431 aa29.04■■■□□ 2.24
CLDND1-226ENST00000513287 SRBD1Q8N5C6 995 aaKnown RBP29.04■■■□□ 2.24
CLDND1-226ENST00000513287 COL4A4P53420 1690 aaPredicted RBP29.04■■■□□ 2.24
CLDND1-226ENST00000513287 KAT6AQ92794 2004 aa29.03■■■□□ 2.24
CLDND1-226ENST00000513287 NRCAMQ92823 1304 aa29.03■■■□□ 2.24
CLDND1-226ENST00000513287 MAFGO15525 162 aa29.03■■■□□ 2.24
CLDND1-226ENST00000513287 NECTIN1Q15223 517 aa29.03■■■□□ 2.24
CLDND1-226ENST00000513287 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.03■■■□□ 2.24
CLDND1-226ENST00000513287 SPRED2Q7Z698 418 aa29.03■■■□□ 2.24
CLDND1-226ENST00000513287 SEPT8Q92599 483 aa29.03■■■□□ 2.24
CLDND1-226ENST00000513287 COL4A6Q14031 1691 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 DOCK5Q9H7D0 1870 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 CCDC69A6NI79 296 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 APBB2Q92870 758 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 TOP1MTQ969P6 601 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 SAMD11Q96NU1 681 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 MYL10Q9BUA6 226 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 PSTPIP2Q9H939 334 aa29.02■■■□□ 2.24
CLDND1-226ENST00000513287 KCNQ1P51787 676 aa29.01■■■□□ 2.23
CLDND1-226ENST00000513287 SGMS1Q86VZ5 419 aa29.01■■■□□ 2.23
CLDND1-226ENST00000513287 PIBF1Q8WXW3 757 aa29.01■■■□□ 2.23
CLDND1-226ENST00000513287 SETD4Q9NVD3 440 aa29.01■■■□□ 2.23
CLDND1-226ENST00000513287 NFXL1Q6ZNB6 911 aa29■■■□□ 2.23
CLDND1-226ENST00000513287 ESYT1Q9BSJ8 1104 aa29■■■□□ 2.23
CLDND1-226ENST00000513287 SLC27A2O14975 620 aa28.99■■■□□ 2.23
CLDND1-226ENST00000513287 PLEKHA8P1O95397 391 aa28.99■■■□□ 2.23
CLDND1-226ENST00000513287 KCNA2P16389 499 aa28.99■■■□□ 2.23
CLDND1-226ENST00000513287 MYOCDQ8IZQ8 938 aa28.99■■■□□ 2.23
CLDND1-226ENST00000513287 GDPD5Q8WTR4 605 aa28.99■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms