RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 ZDHHC14Q8IZN3 488 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 PLEKHO2Q8TD55 490 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 DCAF4Q8WV16 495 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 DIO2Q92813 273 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 PWWP2AQ96N64 755 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 ZFYVE21Q9BQ24 234 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.52□□□□□ -1.53
NUP54-212ENST00000513248 FBXL7Q9UJT9 491 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 DBR1Q9UK59 544 aaKnown RBP5.52□□□□□ -1.53
NUP54-212ENST00000513248 MRPL42Q9Y6G3 142 aaKnown RBP5.52□□□□□ -1.53
NUP54-212ENST00000513248 ABCC2Q92887 1545 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 UGGT2Q9NYU1 1516 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 ADCY10Q96PN6 1610 aa5.52□□□□□ -1.53
NUP54-212ENST00000513248 ABCC10Q5T3U5 1492 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 PRXQ9BXM0 1461 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 IRS2Q9Y4H2 1338 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 F8W031 263 aaPredicted RBP5.51□□□□□ -1.53
NUP54-212ENST00000513248 MSCO60682 206 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 ZNF200P98182 395 aaPredicted RBP5.51□□□□□ -1.53
NUP54-212ENST00000513248 VMACQ2NL98 169 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 ZFYVE27Q5T4F4 411 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 WWC2Q6AWC2 1192 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 TP53I13Q8NBR0 393 aaPredicted RBP5.51□□□□□ -1.53
NUP54-212ENST00000513248 SYT8Q8NBV8 401 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 NETO2Q8NC67 525 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 USP33Q8TEY7 942 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 MARCH2Q9P0N8 246 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 HCFC2Q9Y5Z7 792 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 X6R8D5 127 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 DISP1Q96F81 1524 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 PLB1Q6P1J6 1458 aa5.51□□□□□ -1.53
NUP54-212ENST00000513248 MAPKBP1O60336 1514 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 KIAA0556O60303 1618 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 ESYT3A0FGR9 886 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 BLACEA4D250 179 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 WNT9AO14904 365 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 BUB1BO60566 1050 aaPredicted RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 FUCA1P04066 466 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 IGFBP6P24592 240 aaPredicted RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 RPL11P62913 178 aaKnown RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 PRR5P85299 388 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 ZXDCQ2QGD7 858 aaPredicted RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 KCNT2Q6UVM3 1135 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 MAMDC2Q7Z304 686 aaPredicted RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 PTPRN2Q92932 1015 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 MRPL4Q9BYD3 311 aaKnown RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 ADAM7Q9H2U9 754 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 RXFP1Q9HBX9 757 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 NCOA5Q9HCD5 579 aaKnown RBP5.5□□□□□ -1.53
NUP54-212ENST00000513248 BTG4Q9NY30 223 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 NUDT5Q9UKK9 219 aa5.5□□□□□ -1.53
NUP54-212ENST00000513248 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.49□□□□□ -1.53
NUP54-212ENST00000513248 RFPL3O75679 317 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 NCKAP1LP55160 1127 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 GPR85P60893 370 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 GABREP78334 506 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 LBX2Q6XYB7 198 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 USP53Q70EK8 1073 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 KIAA0907Q7Z7F0 614 aaPredicted RBP5.49□□□□□ -1.53
NUP54-212ENST00000513248 RIOX2Q8IUF8 465 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 TEX2Q8IWB9 1127 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.49□□□□□ -1.53
NUP54-212ENST00000513248 SLC7A14Q8TBB6 771 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 TSPAN17Q96FV3 270 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 PEX11GQ96HA9 241 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 CLUHP3Q96NS8 147 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 CDC6Q99741 560 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 PHF20Q9BVI0 1012 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 TRIM39Q9HCM9 518 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 TIMM13Q9Y5L4 95 aaPredicted RBP5.49□□□□□ -1.53
NUP54-212ENST00000513248 UHRF1BP1LA0JNW5 1464 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 CTTNBP2Q8WZ74 1663 aa5.49□□□□□ -1.53
NUP54-212ENST00000513248 C22orf46C9J442 243 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 PLD2O14939 933 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 MYO1BO43795 1136 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 NTRK1P04629 796 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 PFKLP17858 780 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 FBLN1P23142 703 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 FPR2P25090 351 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 BCL6P41182 706 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 GTF2A2P52657 109 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 PLP2Q04941 152 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 TARBP2Q15633 366 aaKnown RBP5.48□□□□□ -1.53
NUP54-212ENST00000513248 PLEKHG4Q58EX7 1191 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 HABP4Q5JVS0 413 aaKnown RBP5.48□□□□□ -1.53
NUP54-212ENST00000513248 KRTAP5-3Q6L8H2 238 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 DCP2Q8IU60 420 aaKnown RBP5.48□□□□□ -1.53
NUP54-212ENST00000513248 SYNPOQ8N3V7 929 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 ALG3Q92685 438 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 SCLYQ96I15 445 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 TMPRSS5Q9H3S3 457 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 SLC52A2Q9HAB3 445 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 PLA2G2DQ9UNK4 145 aa5.48□□□□□ -1.53
NUP54-212ENST00000513248 DIP2BQ9P265 1576 aa5.47□□□□□ -1.53
NUP54-212ENST00000513248 FAM83GA6ND36 823 aa5.47□□□□□ -1.53
NUP54-212ENST00000513248 H7BY64 318 aa5.47□□□□□ -1.53
NUP54-212ENST00000513248 ARVCFO00192 962 aa5.47□□□□□ -1.53
NUP54-212ENST00000513248 FFAR3O14843 346 aa5.47□□□□□ -1.53
NUP54-212ENST00000513248 PPP1R12AO14974 1030 aaPredicted RBP5.47□□□□□ -1.53
NUP54-212ENST00000513248 KCNA6P17658 529 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms