RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 PRRX2Q99811 253 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 C16orf70Q9BSU1 422 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 UBA5Q9GZZ9 404 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 RWDD3Q9Y3V2 267 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 LAMA4Q16363 1823 aa16.24■□□□□ 0.19
SPCS3-204ENST00000513139 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.23■□□□□ 0.19
SPCS3-204ENST00000513139 C17orf102A2RUQ5 167 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 UPP2O95045 317 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 EIF2AK2P19525 551 aaKnown RBP16.23■□□□□ 0.19
SPCS3-204ENST00000513139 GHRHRQ02643 423 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 PKN1Q16512 942 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 HSDL1Q3SXM5 330 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 ADGRF4Q8IZF3 695 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 OTUD7AQ8TE49 926 aaPredicted RBP16.23■□□□□ 0.19
SPCS3-204ENST00000513139 EDAQ92838 391 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 APBB2Q92870 758 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 ATP6V0A1Q93050 837 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 EVI5LQ96CN4 794 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 SPATA33Q96N06 139 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 C11orf84Q9BUA3 381 aaPredicted RBP16.23■□□□□ 0.19
SPCS3-204ENST00000513139 IFIH1Q9BYX4 1025 aaKnown RBP16.23■□□□□ 0.19
SPCS3-204ENST00000513139 CPVLQ9H3G5 476 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 MAP3K20Q9NYL2 800 aaKnown RBP16.23■□□□□ 0.19
SPCS3-204ENST00000513139 SPTBN4Q9H254 2564 aa16.23■□□□□ 0.19
SPCS3-204ENST00000513139 KMT2EQ8IZD2 1858 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 DOCK5Q9H7D0 1870 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 MBTPS2O43462 519 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 HSD17B4P51659 736 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 SMAD4Q13485 552 aaKnown RBP16.22■□□□□ 0.19
SPCS3-204ENST00000513139 CCDC178Q5BJE1 867 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 RNF135Q8IUD6 432 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 IL17RAQ96F46 866 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 RNF41Q9H4P4 317 aaPredicted RBP16.22■□□□□ 0.19
SPCS3-204ENST00000513139 MUTYHQ9UIF7 546 aa16.22■□□□□ 0.19
SPCS3-204ENST00000513139 H3BRB1 525 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 ST18O60284 1047 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 RGS20O76081 388 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 CTNNB1P35222 781 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 BMPR1AP36894 532 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 PTPN5P54829 565 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 HYAL1Q12794 435 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 QRICH1Q2TAL8 776 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 MCMDC2Q4G0Z9 681 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 ASPRV1Q53RT3 343 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 STOX1Q6ZVD7 989 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 FIBCD1Q8N539 461 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 SAMD3Q8N6K7 520 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 PNMA1Q8ND90 353 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 ESR2Q92731 530 aa16.21■□□□□ 0.19
SPCS3-204ENST00000513139 TUT1Q9H6E5 874 aaKnown RBP16.21■□□□□ 0.19
SPCS3-204ENST00000513139 ZFHX2Q9C0A1 2572 aaPredicted RBP16.21■□□□□ 0.18
SPCS3-204ENST00000513139 SALL3Q9BXA9 1300 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 TREHO43280 583 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 GGPS1O95749 300 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 CFBP00751 764 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 LINC00271P0C7V0 271 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 SMIM10L2AP0DMW4 78 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 SMIM10L2BP0DMW5 78 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 GNAT1P11488 350 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 HAND2P61296 217 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 DLX2Q07687 328 aaPredicted RBP16.2■□□□□ 0.18
SPCS3-204ENST00000513139 VSIG10LQ86VR7 867 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 ANKS1AQ92625 1134 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 CLP1Q92989 425 aaKnown RBP16.2■□□□□ 0.18
SPCS3-204ENST00000513139 PDCD2LQ9BRP1 358 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 RNPEPQ9H4A4 650 aa16.2■□□□□ 0.18
SPCS3-204ENST00000513139 KIAA1671Q9BY89 1806 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 STXBP3O00186 592 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 UBA1P22314 1058 aaKnown RBP16.19■□□□□ 0.18
SPCS3-204ENST00000513139 SP2Q02086 613 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 FAM26DQ5JW98 314 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 IQCA1Q86XH1 822 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 PRSS33Q8NF86 280 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 FAM212AQ96EL1 285 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 USP26Q9BXU7 913 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 OSBPL7Q9BZF2 842 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 JMJD4Q9H9V9 463 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 MLXIPQ9HAP2 919 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 CD207Q9UJ71 328 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 CCDC171Q6TFL3 1326 aa16.19■□□□□ 0.18
SPCS3-204ENST00000513139 A0A0D9SFI3 127 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 RBAK-RBAKDNI3L0D1 243 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 OPLAHO14841 1288 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 GRM6O15303 877 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 TBX10O75333 385 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 EYA4O95677 639 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 CENPBP07199 599 aaPredicted RBP16.18■□□□□ 0.18
SPCS3-204ENST00000513139 MYCLP12524 364 aaPredicted RBP16.18■□□□□ 0.18
SPCS3-204ENST00000513139 FXR2P51116 673 aaKnown RBP eCLIP16.18■□□□□ 0.18
SPCS3-204ENST00000513139 IRX6P78412 446 aaPredicted RBP16.18■□□□□ 0.18
SPCS3-204ENST00000513139 ADAM15Q13444 863 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 PGM5Q15124 567 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 CLUL1Q15846 466 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 TRIM67Q6ZTA4 783 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 TBC1D10CQ8IV04 446 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 FAM227BQ96M60 508 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 PHOX2BQ99453 314 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 ZKSCAN3Q9BRR0 538 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 PLVAPQ9BX97 442 aa16.18■□□□□ 0.18
SPCS3-204ENST00000513139 AMNQ9BXJ7 453 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms