RNA–Protein interactions for RNA: ENST00000512928.1

KDM3B-208, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 627 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-208ENST00000512928 hCG_1984214I3L0E3 225 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 STXBP3O00186 592 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 PPFIA4O75335 1185 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 F2P00734 622 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 FGBP02675 491 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 SCG2P13521 617 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 RCAN1P53805 252 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 PTPN11Q06124 597 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 BFSP2Q13515 415 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 PFKFB3Q16875 520 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 TMEM240Q5SV17 173 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 JAKMIP3Q5VZ66 844 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 TYW1BQ6NUM6 668 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 METTL7BQ6UX53 244 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 C16orf59Q7L2K0 433 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 TRIM50Q86XT4 487 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 RPUSD2Q8IZ73 545 aaKnown RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 ZNF713Q8N859 430 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 GIMAP8Q8ND71 665 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 CCDC12Q8WUD4 166 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 KAT2BQ92831 832 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 CDHR1Q96JP9 859 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 USP26Q9BXU7 913 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 ANO3Q9BYT9 981 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 ZSWIM6Q9HCJ5 1215 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 C6orf50Q9HD87 102 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 RIC8AQ9NPQ8 531 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 FAM217BQ9NTX9 383 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 PDRG1Q9NUG6 133 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 HDAC6Q9UBN7 1215 aa7.44□□□□□ -1.22
KDM3B-208ENST00000512928 ZNF215Q9UL58 517 aaPredicted RBP7.44□□□□□ -1.22
KDM3B-208ENST00000512928 CDH23Q9H251 3354 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 CUL9Q8IWT3 2517 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 C17orf102A2RUQ5 167 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GRXCR1A8MXD5 290 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 H3BRB1 525 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 DDX39AO00148 427 aaKnown RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 LGALS2P05162 132 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 ITGB5P18084 799 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 MARK3P27448 753 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 PDIA3P30101 505 aaKnown RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 ICAM3P32942 547 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 TCF7P36402 384 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 SMAD3P84022 425 aaKnown RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 ZNF200P98182 395 aaPredicted RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 FUT2Q10981 343 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 SEMA3FQ13275 785 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 AP3B2Q13367 1082 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GPR153Q6NV75 609 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 REXO1Q8N1G1 1221 aaKnown RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GLG1Q92896 1179 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GPRASP2Q96D09 838 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 UIMC1Q96RL1 719 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GPR20Q99678 358 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 SDF4Q9BRK5 362 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GLT8D2Q9H1C3 349 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 TUT1Q9H6E5 874 aaKnown RBP7.43□□□□□ -1.22
KDM3B-208ENST00000512928 VPS54Q9P1Q0 977 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 GTF2IRD1Q9UHL9 959 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 TELO2Q9Y4R8 837 aa7.43□□□□□ -1.22
KDM3B-208ENST00000512928 PITPNM1O00562 1244 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 PRPF3O43395 683 aaKnown RBP7.42□□□□□ -1.22
KDM3B-208ENST00000512928 ATP9AO75110 1047 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 FOSP01100 380 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-208ENST00000512928 PFKMP08237 780 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 IQCF3P0C7M6 154 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 SMIM10L2AP0DMW4 78 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 SMIM10L2BP0DMW5 78 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 ACTN1P12814 892 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 SELPP16109 830 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 KCNA2P16389 499 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 DNAJB2P25686 324 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 GNA11P29992 359 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 RFC2P35250 354 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 THPOP40225 353 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 PBX2P40425 430 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 NLRP5P59047 1200 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 ARHGAP4P98171 946 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 SSRP1Q08945 709 aaKnown RBP7.42□□□□□ -1.22
KDM3B-208ENST00000512928 TOB2Q14106 344 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-208ENST00000512928 CPLX2Q6PUV4 134 aaKnown RBP7.42□□□□□ -1.22
KDM3B-208ENST00000512928 LRRC8DQ7L1W4 858 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 SESTD1Q86VW0 696 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 FBXL16Q8N461 479 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 CCDC148Q8NFR7 591 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 MAFAQ8NHW3 353 aaPredicted RBP7.42□□□□□ -1.22
KDM3B-208ENST00000512928 CYP2W1Q8TAV3 490 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 CAGE1Q8TC20 777 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 BICD2Q8TD16 824 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 RASGRP4Q8TDF6 673 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 AFAP1L1Q8TED9 768 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 ATP6V0A1Q93050 837 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 TIFAQ96CG3 184 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 SENP7Q9BQF6 1050 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 MXRA8Q9BRK3 442 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 C16orf70Q9BSU1 422 aa7.42□□□□□ -1.22
KDM3B-208ENST00000512928 RNF26Q9BY78 433 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms