RNA–Protein interactions for RNA: ENST00000512881.5

RFC1-215, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-215ENST00000512881 GH2P01242 217 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 GJB1P08034 283 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 PDE6AP16499 860 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 CDC25BP30305 580 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 HOXA7P31268 230 aaPredicted RBP8.31□□□□□ -1.08
RFC1-215ENST00000512881 CD68P34810 354 aaPredicted RBP8.31□□□□□ -1.08
RFC1-215ENST00000512881 UBXN2AP68543 259 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 FAM110CQ1W6H9 321 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 SLC9C2Q5TAH2 1124 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 C20orf194Q5TEA3 1177 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 TATDN1Q6P1N9 297 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 TTC6Q86TZ1 520 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.31□□□□□ -1.08
RFC1-215ENST00000512881 FOXD4L4Q8WXT5 416 aaPredicted RBP8.31□□□□□ -1.08
RFC1-215ENST00000512881 COA7Q96BR5 231 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 DNAJC2Q99543 621 aaKnown RBP8.31□□□□□ -1.08
RFC1-215ENST00000512881 P2RX7Q99572 595 aaKnown RBP8.31□□□□□ -1.08
RFC1-215ENST00000512881 RIOK1Q9BRS2 568 aaKnown RBP8.31□□□□□ -1.08
RFC1-215ENST00000512881 RNF208Q9H0X6 261 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 ZBTB21Q9ULJ3 1066 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 MTMR7Q9Y216 660 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 MYH2Q9UKX2 1941 aa8.31□□□□□ -1.08
RFC1-215ENST00000512881 H3BRJ5 948 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 TNFRSF21O75509 655 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 POLR3DP05423 398 aaPredicted RBP8.3□□□□□ -1.08
RFC1-215ENST00000512881 GJA8P48165 433 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 IRX3P78415 501 aaPredicted RBP8.3□□□□□ -1.08
RFC1-215ENST00000512881 PDE3AQ14432 1141 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 CERKLQ49MI3 558 aaPredicted RBP8.3□□□□□ -1.08
RFC1-215ENST00000512881 GJD3Q8N144 294 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 SNX29Q8TEQ0 813 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 EHD4Q9H223 541 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 BOLA2Q9H3K6 86 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 ANO2Q9NQ90 1003 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 SERPINB13Q9UIV8 391 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 FOXD3Q9UJU5 478 aaPredicted RBP8.3□□□□□ -1.08
RFC1-215ENST00000512881 GJD2Q9UKL4 321 aa8.3□□□□□ -1.08
RFC1-215ENST00000512881 ZNF532Q9HCE3 1301 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 AK9Q5TCS8 1911 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 MYH13Q9UKX3 1938 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 TCRBV5S4A2TA0A5A2 114 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 EREGO14944 169 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 ABL1P00519 1130 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 GLB1P16278 677 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 ATP5JP18859 108 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 PLCD1P51178 756 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 HERVK_113P62684 666 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 RAB3GAP1Q15042 981 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 ABCB5Q2M3G0 1257 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 ACAD11Q709F0 780 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 KLHL23Q8NBE8 558 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 GPRC5AQ8NFJ5 357 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 GCC1Q96CN9 775 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 SHISA4Q96DD7 197 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 EDC3Q96F86 508 aaKnown RBP8.29□□□□□ -1.08
RFC1-215ENST00000512881 CRNKL1Q9BZJ0 848 aaKnown RBP8.29□□□□□ -1.08
RFC1-215ENST00000512881 MCM9Q9NXL9 1143 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 RBPJLQ9UBG7 517 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 MORF4L1Q9UBU8 362 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 SOX13Q9UN79 622 aa8.29□□□□□ -1.08
RFC1-215ENST00000512881 PDE2AO00408 941 aaPredicted RBP8.28□□□□□ -1.08
RFC1-215ENST00000512881 SMARCA5O60264 1052 aaPredicted RBP8.28□□□□□ -1.08
RFC1-215ENST00000512881 PEX10O60683 326 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 PHACTR2O75167 634 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 SGPL1O95470 568 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 TFRCP02786 760 aaKnown RBP8.28□□□□□ -1.08
RFC1-215ENST00000512881 SHMT1P34896 483 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 ARTNQ5T4W7 220 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 FAM117BQ6P1L5 589 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 KIAA1211Q6ZU35 1233 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 UBE2Q1Q7Z7E8 422 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 LCORLQ8N3X6 602 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 TMEM102Q8N9M5 508 aaPredicted RBP8.28□□□□□ -1.08
RFC1-215ENST00000512881 TTC16Q8NEE8 873 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 ACER1Q8TDN7 264 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 UBASH3BQ8TF42 649 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 U2AF1L4Q8WU68 220 aaKnown RBP8.28□□□□□ -1.08
RFC1-215ENST00000512881 UBL7Q96S82 380 aaPredicted RBP8.28□□□□□ -1.08
RFC1-215ENST00000512881 HAUS7Q99871 368 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 ZKSCAN3Q9BRR0 538 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 LRRCC1Q9C099 1032 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 ARMT1Q9H993 441 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 TXNRD2Q9NNW7 524 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 CABP5Q9NP86 173 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 PAG1Q9NWQ8 432 aa8.28□□□□□ -1.08
RFC1-215ENST00000512881 H0YGN5 161 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 DDX3YO15523 660 aaKnown RBP8.27□□□□□ -1.09
RFC1-215ENST00000512881 PRKAB2O43741 272 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 CYP2D6P10635 497 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 GUCY1A2P33402 732 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 ADD2P35612 726 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 USP14P54578 494 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 GABPAQ06546 454 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 EHHADHQ08426 723 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 ZYXQ15942 572 aaKnown RBP8.27□□□□□ -1.09
RFC1-215ENST00000512881 HABP4Q5JVS0 413 aaKnown RBP8.27□□□□□ -1.09
RFC1-215ENST00000512881 SDR42E1Q8WUS8 393 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 DPF3Q92784 378 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 PMEPA1Q969W9 287 aa8.27□□□□□ -1.09
RFC1-215ENST00000512881 KLHDC7BQ96G42 594 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms