RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 CCDC186Q7Z3E2 898 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 METTL16Q86W50 562 aaKnown RBP10.69□□□□□ -0.7
MSH3-203ENST00000512531 DHX40Q8IX18 779 aaKnown RBP10.69□□□□□ -0.7
MSH3-203ENST00000512531 RASSF8Q8NHQ8 419 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 ZNF384Q8TF68 577 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 CCDC17Q96LX7 622 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 CTAGE1Q96RT6 745 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 RAB34Q9BZG1 259 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 MAGEF1Q9HAY2 307 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 SPTLC3Q9NUV7 552 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 PI4KBQ9UBF8 816 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 OGDHLQ9ULD0 1010 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
MSH3-203ENST00000512531 ASNSP08243 561 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 TPM1P09493 284 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 SLFN14P0C7P3 912 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 CYP2D6P10635 497 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 SFPQP23246 707 aaKnown RBP eCLIP10.68□□□□□ -0.7
MSH3-203ENST00000512531 ERCC5P28715 1186 aaPredicted RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 PPP1R2P41236 205 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 ATP2C1P98194 919 aaPredicted RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 TRAF1Q13077 416 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 NR5A1Q13285 461 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 STIM1Q13586 685 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 LRIT3Q3SXY7 679 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 FILIP1LQ4L180 1135 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 TMEM164Q5U3C3 297 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 MCTP2Q6DN12 878 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 PPP1R18Q6NYC8 613 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 FOXP4Q8IVH2 680 aaPredicted RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 SRBD1Q8N5C6 995 aaKnown RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 SLC17A8Q8NDX2 589 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 SOCS4Q8WXH5 440 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 ZFRQ96KR1 1074 aaKnown RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 GSDMAQ96QA5 445 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 ASCC2Q9H1I8 757 aaPredicted RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 CUEDC2Q9H467 287 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 TTC12Q9H892 705 aaPredicted RBP10.68□□□□□ -0.7
MSH3-203ENST00000512531 BARHL2Q9NY43 387 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 PCDHB6Q9Y5E3 794 aa10.68□□□□□ -0.7
MSH3-203ENST00000512531 PLIN4Q96Q06 1357 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 RASA1P20936 1047 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 TOB1P50616 345 aaPredicted RBP10.67□□□□□ -0.7
MSH3-203ENST00000512531 PLCD1P51178 756 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 HMGCS2P54868 508 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 NAPAP54920 295 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 BACE1P56817 501 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 TPD52L1Q16890 204 aaPredicted RBP10.67□□□□□ -0.7
MSH3-203ENST00000512531 DPCR1Q3MIW9 517 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 GPATCH4Q5T3I0 446 aaKnown RBP10.67□□□□□ -0.7
MSH3-203ENST00000512531 NT5DC1Q5TFE4 455 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 DTHD1Q6ZMT9 781 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 PIK3AP1Q6ZUJ8 805 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 HEATR3Q7Z4Q2 680 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 CMTR1Q8N1G2 835 aaKnown RBP10.67□□□□□ -0.7
MSH3-203ENST00000512531 KIAA1524Q8TCG1 905 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 AK8Q96MA6 479 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 CLIC6Q96NY7 704 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 MAP7D2Q96T17 732 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 TMEM47Q9BQJ4 181 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 OCSTAMPQ9BR26 566 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 LRRC27Q9C0I9 530 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 CSRNP2Q9H175 543 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 MAP10Q9P2G4 905 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 SAP30BPQ9UHR5 308 aaKnown RBP10.67□□□□□ -0.7
MSH3-203ENST00000512531 SERPINB13Q9UIV8 391 aa10.67□□□□□ -0.7
MSH3-203ENST00000512531 R3HCC1Q9Y3T6 440 aaKnown RBP10.67□□□□□ -0.7
MSH3-203ENST00000512531 MYH1P12882 1939 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 ALPK3Q96L96 1907 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 ESYT2A0FGR8 921 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 KLRF2D3W0D1 207 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 BIN1O00499 593 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 SOX1O00570 391 aaPredicted RBP10.66□□□□□ -0.7
MSH3-203ENST00000512531 TTLL1O95922 423 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 PTGS1P23219 599 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 MAPK4P31152 587 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 PRPHP41219 470 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 UBASH3AP57075 661 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 IRX3P78415 501 aaPredicted RBP10.66□□□□□ -0.7
MSH3-203ENST00000512531 AMPD3Q01432 767 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 SPAG1Q07617 926 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 PNOCQ13519 176 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 TMEM266Q2M3C6 531 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 LONRF3Q496Y0 759 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 RCSD1Q6JBY9 416 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 SND1Q7KZF4 910 aaKnown RBP eCLIP10.66□□□□□ -0.7
MSH3-203ENST00000512531 LAPTM4BQ86VI4 370 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 GPRC5AQ8NFJ5 357 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 ENOX1Q8TC92 643 aaKnown RBP10.66□□□□□ -0.7
MSH3-203ENST00000512531 DIS3LQ8TF46 1054 aaKnown RBP10.66□□□□□ -0.7
MSH3-203ENST00000512531 DYNLL2Q96FJ2 89 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 NUDT12Q9BQG2 462 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 EHD4Q9H223 541 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 C11orf49Q9H6J7 331 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 TMOD4Q9NZQ9 345 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 PAXBP1Q9Y5B6 917 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 CUL9Q8IWT3 2517 aa10.66□□□□□ -0.7
MSH3-203ENST00000512531 VWA3AA6NCI4 1184 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 GOLGA6L9A6NEM1 432 aa10.65□□□□□ -0.7
MSH3-203ENST00000512531 ZBBXA8MT70 800 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms