RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 USP17L13C9JLJ4 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L11C9JVI0 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L18D6R9N7 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L22D6RA61 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L17D6RBQ6 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L19D6RCP7 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L20D6RJB6 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 H3BQF6 201 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 TRAF5O00463 557 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 PLEKP08567 350 aaPredicted RBP10.22□□□□□ -0.77
CPNE4-210ENST00000512332 TCP1P17987 556 aaKnown RBP10.22□□□□□ -0.77
CPNE4-210ENST00000512332 CYP11B2P19099 503 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 ATP2B2Q01814 1243 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L24Q0WX57 530 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 LRRC41Q15345 812 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 CDC37Q16543 378 aaPredicted RBP10.22□□□□□ -0.77
CPNE4-210ENST00000512332 USP17L6PQ6QN14 398 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 TMEM179Q6ZVK1 233 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 KRT26Q7Z3Y9 468 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 SIAH1Q8IUQ4 282 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 ZFPM1Q8IX07 1006 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 MMGT1Q8N4V1 131 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 CCDC155Q8N6L0 562 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 GLIS3Q8NEA6 775 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 ETNPPLQ8TBG4 499 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 AMNQ9BXJ7 453 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 KCTD10Q9H3F6 313 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 DEF6Q9H4E7 631 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 PDE11AQ9HCR9 933 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 MED4Q9NPJ6 270 aa10.22□□□□□ -0.77
CPNE4-210ENST00000512332 MACROD2A1Z1Q3 448 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 E9PMD0 336 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 SRGAP2O75044 1071 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 CIITAP33076 1130 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 MAGEA1P43355 309 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 SLC12A3P55017 1021 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 HGSNATQ68CP4 663 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 CACNA2D4Q7Z3S7 1137 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 KRT27Q7Z3Y8 459 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 CREG2Q8IUH2 290 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 FLAD1Q8NFF5 587 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 ERMNQ8TAM6 284 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 SCFD1Q8WVM8 642 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 FAM20AQ96MK3 541 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 ALS2CR12Q96Q35 445 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 JADE2Q9NQC1 790 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 EMILIN3Q9NT22 766 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 FAM198AQ9UFP1 575 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 SERPINA10Q9UK55 444 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 ADAM21Q9UKJ8 722 aa10.21□□□□□ -0.77
CPNE4-210ENST00000512332 DDTLA6NHG4 134 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-210ENST00000512332 NOL4O94818 638 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 TRIM37O94972 964 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 SERPING1P05155 500 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 RPA1P27694 616 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 AARSP49588 968 aaKnown RBP eCLIP10.21□□□□□ -0.78
CPNE4-210ENST00000512332 ARHGAP4P98171 946 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 SLC9C1Q4G0N8 1177 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 CCDC40Q4G0X9 1142 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 HERC4Q5GLZ8 1057 aaPredicted RBP10.21□□□□□ -0.78
CPNE4-210ENST00000512332 BTNL9Q6UXG8 535 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 GPBP1Q86WP2 473 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 FAM71BQ8TC56 605 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 LUC7LQ9NQ29 371 aaKnown RBP10.21□□□□□ -0.78
CPNE4-210ENST00000512332 TSKSQ9UJT2 592 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 TRAF3IP3Q9Y228 551 aa10.21□□□□□ -0.78
CPNE4-210ENST00000512332 ARFGEF1Q9Y6D6 1849 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 SIPA1L1O43166 1804 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 F5H6K3 240 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 PDE2AO00408 941 aaPredicted RBP10.2□□□□□ -0.78
CPNE4-210ENST00000512332 MED24O75448 989 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 SREBF1P36956 1147 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 KLRC3Q07444 240 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 ARSHQ5FYA8 562 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 DACT2Q5SW24 774 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 FAM83BQ5T0W9 1011 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 SFMBT2Q5VUG0 894 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 CCDC70Q6NSX1 233 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 SYT2Q8N9I0 419 aaPredicted RBP10.2□□□□□ -0.78
CPNE4-210ENST00000512332 GJA10Q969M2 543 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 AKT1S1Q96B36 256 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 TANGO6Q9C0B7 1094 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 QTRT2Q9H974 415 aaKnown RBP10.2□□□□□ -0.78
CPNE4-210ENST00000512332 SUGCTQ9HAC7 445 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 AIPL1Q9NZN9 384 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 CALCOCO1Q9P1Z2 691 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 RNF14Q9UBS8 474 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.2□□□□□ -0.78
CPNE4-210ENST00000512332 CAPN6Q9Y6Q1 641 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 ATRNL1Q5VV63 1379 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 ATAD5Q96QE3 1844 aa10.2□□□□□ -0.78
CPNE4-210ENST00000512332 POTEB3A0JP26 581 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 POTECB2RU33 542 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 PLSCR1O15162 318 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 CETN3O15182 167 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 ENTPD3O75355 529 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 SSBP05455 408 aaKnown RBP eCLIP10.19□□□□□ -0.78
CPNE4-210ENST00000512332 CYP3A4P08684 503 aa10.19□□□□□ -0.78
CPNE4-210ENST00000512332 ICA1Q05084 483 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms