RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 ITGA6P23229 1130 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 CTGFP29279 349 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 ZC3H6P61129 1189 aaKnown RBP1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 CWF19L2Q2TBE0 894 aaKnown RBP1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 KIAA1755Q5JYT7 1200 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPP4R3BQ5MIZ7 849 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 TEX35Q5T0J7 233 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 UBE3BQ7Z3V4 1068 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 LUZP1Q86V48 1076 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 ARFGAP1Q8N6T3 406 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 MAB21L3Q8N8X9 362 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 NRG4Q8WWG1 115 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 PPM1EQ8WY54 764 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 MYRFLQ96LU7 910 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 TRIM34Q9BYJ4 488 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 PUS3Q9BZE2 481 aaKnown RBP1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 GRHL1Q9NZI5 618 aa1.9□□□□□ -2.1
TRAPPC13-211ENST00000512009 NBASA2RRP1 2371 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 UPK3BL1B0FP48 263 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 UPK3BL2E5RIL1 263 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 TRAFD1O14545 582 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ARHGAP33O14559 1287 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CYP3A4P08684 503 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZSCAN22P10073 491 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 HSPD1P10809 573 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 MCCP23508 829 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 GJA5P36382 358 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPP4CP60510 307 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SF3B2Q13435 895 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 GPNMBQ14956 572 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SHROOM1Q2M3G4 852 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 LRRFIP1Q32MZ4 808 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 GPAT2Q6NUI2 795 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ELMSAN1Q6PJG2 1045 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SPATA24Q86W54 205 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 C2orf69Q8N8R5 385 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC89Q8N998 374 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ANKRD20A12PQ8NF67 263 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 HELBQ8NG08 1087 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SCFD2Q8WU76 684 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 HAS1Q92839 578 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CNKSR1Q969H4 720 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPP1R13BQ96KQ4 1090 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF778Q96MU6 729 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PRDM16Q9HAZ2 1276 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 EMILIN3Q9NT22 766 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PCDHAC2Q9Y5I4 1007 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 RPS6KL1Q9Y6S9 549 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 DNAH17Q9UFH2 4485 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZBTB7CA1YPR0 619 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 IQCA1LA6NCM1 817 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 APBA3O96018 575 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CD4P01730 458 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SLURP2P0DP57 97 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PEX5P50542 639 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 NDUFA8P51970 172 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PDE4CQ08493 712 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 TOGARAM2Q6ZUX3 1019 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PPP1R42Q7Z4L9 355 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 IRF2BP2Q7Z5L9 587 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 FAM124AQ86V42 546 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 MNS1Q8NEH6 495 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 FBXO18Q8NFZ0 1043 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCT6BQ92526 530 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 HEXIM2Q96MH2 286 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZNF570Q96NI8 536 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CSRNP1Q96S65 589 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 INSM2Q96T92 566 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PTPN18Q99952 460 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PHF20Q9BVI0 1012 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PA2G4Q9UQ80 394 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ZDBF2Q9HCK1 2354 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ITIH6Q6UXX5 1313 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 RPTORQ8N122 1335 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 A0A087WZG4 1122 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SYCE3A1L190 88 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 TMEM88BA6NKF7 163 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SNAP23O00161 211 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 PI15O43692 258 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 GJB1P08034 283 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 DPEP1P16444 411 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 RPS6KB1P23443 525 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 WEE1P30291 646 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CD97P48960 835 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 SMAD3P84022 425 aaKnown RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 TCIRG1Q13488 830 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 QPCTQ16769 361 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 GORABQ5T7V8 394 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 IGSF22Q8N9C0 903 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 KLHDC9Q8NEP7 349 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 NUDT12Q9BQG2 462 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 C11orf84Q9BUA3 381 aaPredicted RBP1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 NDST4Q9H3R1 872 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 CCDC87Q9NVE4 849 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ARHGAP20Q9P2F6 1191 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 TBX21Q9UL17 535 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 ANKRD6Q9Y2G4 727 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 UMODL1Q5DID0 1318 aa1.9□□□□□ -2.11
TRAPPC13-211ENST00000512009 INF2Q27J81 1249 aa1.89□□□□□ -2.11
TRAPPC13-211ENST00000512009 KLHL10Q6JEL2 608 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms