RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 TMOD1P28289 359 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CSE1LP55060 971 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ANKRD1Q15327 319 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 PPP2R5EQ16537 467 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 DDR2Q16832 855 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 PERM1Q5SV97 790 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SWT1Q5T5J6 900 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 NEK10Q6ZWH5 1172 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SPATC1Q76KD6 591 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ENOSF1Q7L5Y1 443 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SYNE4Q8N205 404 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 NLGN2Q8NFZ4 835 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 NINJ1Q92982 152 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 TRIM63Q969Q1 353 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CLMNQ96JQ2 1002 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 LRGUKQ96M69 825 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 MYD88Q99836 296 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 NACA2Q9H009 215 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SLC5A4Q9NY91 659 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZBTB21Q9ULJ3 1066 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 GPR52Q9Y2T5 361 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 MAP3K2Q9Y2U5 619 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 LAMB4A4D0S4 1761 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CASZ1Q86V15 1759 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 A0A0G2JLW4 131 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ANKRD18BA2A2Z9 1011 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 M0R3H8 397 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 MAP3K6O95382 1288 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SEC24BO95487 1268 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CNOT4O95628 575 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 FGFR1OPO95684 399 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 GUCA1CO95843 209 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 GNAT2P19087 354 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 TNNT3P45378 269 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 LIMK1P53667 647 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 STRN3Q13033 797 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 PPP2R5DQ14738 602 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 KRT72Q14CN4 511 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 PSMD6Q15008 389 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CWF19L2Q2TBE0 894 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 KIF4BQ2VIQ3 1234 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 C11orf91Q3C1V1 193 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 HECTD3Q5T447 861 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SPATA1Q5VX52 437 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 TRIM74Q86UV6 250 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 TRIM73Q86UV7 250 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCDC144CPQ8IYA2 1237 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 RTKN2Q8IZC4 609 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 CNBD1Q8NA66 436 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 RIN3Q8TB24 985 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 TSGA13Q96PP4 275 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SLC26A6Q9BXS9 759 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 ELAC1Q9H777 363 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 KBTBD4Q9NVX7 518 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 TRHDEQ9UKU6 1024 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 LUC7L2Q9Y383 392 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 PCDHGA4Q9Y5G9 962 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 SQORQ9Y6N5 450 aa5.62□□□□□ -1.51
TRAPPC11-208ENST00000511955 FRMPD2Q68DX3 1309 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 UBN2Q6ZU65 1347 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZNF831Q5JPB2 1677 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 CICQ96RK0 1608 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 POLRMTO00411 1230 aaKnown RBP5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 AHCYL1O43865 530 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 RFPL1O75677 317 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 DKK1O94907 266 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 CHRNA5P30532 468 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 PDE4BQ07343 736 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 ADCY1Q08828 1119 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZBTB17Q13105 803 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 SEMA3AQ14563 771 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 CCDC81Q6ZN84 652 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 MFSD6Q6ZSS7 791 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 CEP68Q76N32 757 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 SLC39A7Q92504 469 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 FAM89AQ96GI7 184 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 JAKMIP1Q96N16 626 aaKnown RBP5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 BAG1Q99933 345 aaPredicted RBP5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 SYT17Q9BSW7 474 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 UNC45AQ9H3U1 944 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 CPSF2Q9P2I0 782 aaKnown RBP5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 WDR35Q9P2L0 1181 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 EPS15L1Q9UBC2 864 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 MTRRQ9UBK8 725 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 LAMP5Q9UJQ1 280 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 CARMIL3Q8ND23 1372 aa5.61□□□□□ -1.51
TRAPPC11-208ENST00000511955 H0YC42 278 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 DYNC1I1O14576 645 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 ZBTB39O15060 712 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 P4HA2O15460 535 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 SART1O43290 800 aaKnown RBP5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 DDX58O95786 925 aaKnown RBP5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 CYP17A1P05093 508 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 FDX1P10109 184 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 GZMAP12544 262 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 TM4SF1P30408 202 aa5.6□□□□□ -1.51
TRAPPC11-208ENST00000511955 RRP1P56182 461 aaKnown RBP5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms