RNA–Protein interactions for RNA: ENST00000511019.1

TRIO-217, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 430 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-217ENST00000511019 BCAS3Q9H6U6 928 aa9.63□□□□□ -0.87
TRIO-217ENST00000511019 SENP2Q9HC62 589 aa9.63□□□□□ -0.87
TRIO-217ENST00000511019 SCN5AQ14524 2016 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 CAND2O75155 1236 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 LGALS2P05162 132 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 GSPT1P15170 499 aaKnown RBP9.62□□□□□ -0.87
TRIO-217ENST00000511019 SMARCA1P28370 1054 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 UTP14CQ5TAP6 766 aaKnown RBP9.62□□□□□ -0.87
TRIO-217ENST00000511019 XRRA1Q6P2D8 792 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 METTL7BQ6UX53 244 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 CYFIP1Q7L576 1253 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 NLRX1Q86UT6 975 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 TMTC2Q8N394 836 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 GIMAP8Q8ND71 665 aaPredicted RBP9.62□□□□□ -0.87
TRIO-217ENST00000511019 FBXO22Q8NEZ5 403 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 CTCFLQ8NI51 663 aaPredicted RBP9.62□□□□□ -0.87
TRIO-217ENST00000511019 IGDCC4Q8TDY8 1250 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 GDPD5Q8WTR4 605 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 TOP1MTQ969P6 601 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 RRP36Q96EU6 259 aaKnown RBP9.62□□□□□ -0.87
TRIO-217ENST00000511019 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
TRIO-217ENST00000511019 MAP3K14Q99558 947 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 GPR20Q99678 358 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 C17orf80Q9BSJ5 609 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 EPHX3Q9H6B9 360 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 SETD4Q9NVD3 440 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 RAPGEFL1Q9UHV5 662 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 UNC80Q8N2C7 3258 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 GBF1Q92538 1859 aa9.62□□□□□ -0.87
TRIO-217ENST00000511019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.61□□□□□ -0.87
TRIO-217ENST00000511019 UPP2O95045 317 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 KIF5BP33176 963 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 GNAQP50148 359 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 HTRA4P83105 476 aaPredicted RBP9.61□□□□□ -0.87
TRIO-217ENST00000511019 MKRN4PQ13434 485 aaPredicted RBP9.61□□□□□ -0.87
TRIO-217ENST00000511019 PTPROQ16827 1216 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 MAP4K1Q92918 833 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 SAMD11Q96NU1 681 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 YME1L1Q96TA2 773 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 SENP7Q9BQF6 1050 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 LZTS2Q9BRK4 669 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 SEC63Q9UGP8 760 aaKnown RBP9.61□□□□□ -0.87
TRIO-217ENST00000511019 ZNF215Q9UL58 517 aaPredicted RBP9.61□□□□□ -0.87
TRIO-217ENST00000511019 SUPT16HQ9Y5B9 1047 aaKnown RBP9.61□□□□□ -0.87
TRIO-217ENST00000511019 A0A0C4DFX4 3053 aa9.61□□□□□ -0.87
TRIO-217ENST00000511019 PIK3CDO00329 1044 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 SGSM2O43147 1006 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 CTSHP09668 335 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 HOXC8P31273 242 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 ARHGAP4P98171 946 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 SP4Q02446 784 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 EPC2Q52LR7 807 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 FAM26DQ5JW98 314 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 PCNX4Q63HM2 1172 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 USP17L6PQ6QN14 398 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 CASC1Q6TDU7 716 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 NFXL1Q6ZNB6 911 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 ZNF654Q8IZM8 581 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 SP7Q8TDD2 431 aaPredicted RBP9.6□□□□□ -0.87
TRIO-217ENST00000511019 APBB2Q92870 758 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 FAM122AQ96E09 287 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 MTA3Q9BTC8 594 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 SPZ1Q9BXG8 430 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
TRIO-217ENST00000511019 PSTPIP2Q9H939 334 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 TAF6LQ9Y6J9 622 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 CDH23Q9H251 3354 aa9.6□□□□□ -0.87
TRIO-217ENST00000511019 FRMPD4Q14CM0 1322 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 NRCAMQ92823 1304 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.59□□□□□ -0.87
TRIO-217ENST00000511019 CCDC69A6NI79 296 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 H3BNC9 293 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 RBAK-RBAKDNI3L0D1 243 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 MEIS2O14770 477 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 PRC1O43663 620 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 DDAH1O94760 285 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 CALM1P0DP23 149 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 CALM2P0DP24 149 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 CALM3P0DP25 149 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 KCNA5P22460 613 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 MCM5P33992 734 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 ANTXR2P58335 489 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 ADAM17P78536 824 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 SEMA3FQ13275 785 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 GPM6BQ13491 265 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 PUS10Q3MIT2 529 aaKnown RBP9.59□□□□□ -0.87
TRIO-217ENST00000511019 LEXMQ3ZCV2 418 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 TMEM31Q5JXX7 168 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 RSPH3Q86UC2 560 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 TMEM192Q8IY95 271 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 MB21D2Q8IYB1 491 aaPredicted RBP9.59□□□□□ -0.87
TRIO-217ENST00000511019 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.59□□□□□ -0.87
TRIO-217ENST00000511019 SEPT1Q8WYJ6 367 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 MRPL38Q96DV4 380 aaKnown RBP9.59□□□□□ -0.87
TRIO-217ENST00000511019 IL17RAQ96F46 866 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 CDHR1Q96JP9 859 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 TMEM87BQ96K49 555 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 LRFN3Q9BTN0 628 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 MYL10Q9BUA6 226 aa9.59□□□□□ -0.87
TRIO-217ENST00000511019 IFIH1Q9BYX4 1025 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms