RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 GALNT17Q6IS24 598 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 CYFIP1Q7L576 1253 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 NIPA1Q7RTP0 329 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 NSUN7Q8NE18 718 aaKnown RBP13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 RASGRP4Q8TDF6 673 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 CTAGE1Q96RT6 745 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 GPR20Q99678 358 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 TRPV6Q9H1D0 765 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 KCNH7Q9NS40 1196 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 PCDHA4Q9UN74 947 aa13.42□□□□□ -0.26
HMGXB3-203ENST00000510472 IGLV3-22A0A075B6J6 115 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 A0A1W2PPC1 479 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 SORBS3O60504 671 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 TIMP1P01033 207 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 MDM2Q00987 491 aaPredicted RBP13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 GIMAP8Q8ND71 665 aaPredicted RBP13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 IL27Q8NEV9 243 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 BADQ92934 168 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 TBC1D32Q96NH3 1257 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 PHF20Q9BVI0 1012 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 PRDM5Q9NQX1 630 aaPredicted RBP13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 ORC3Q9UBD5 711 aaPredicted RBP13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 PRKAG2Q9UGJ0 569 aa13.41□□□□□ -0.26
HMGXB3-203ENST00000510472 TLR3O15455 904 aaKnown RBP13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 DHX15O43143 795 aaKnown RBP13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 PSEN2P49810 448 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 RABEP1Q15276 862 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 BLIDQ8IZY5 108 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 PPP1R13LQ8WUF5 828 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 LENG9Q96B70 501 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 BACH2Q9BYV9 841 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 AGO4Q9HCK5 861 aaKnown RBP13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 GJB4Q9NTQ9 266 aa13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 TRMT13Q9NUP7 481 aaKnown RBP13.4□□□□□ -0.26
HMGXB3-203ENST00000510472 SCN10AQ9Y5Y9 1956 aa13.4□□□□□ -0.27
HMGXB3-203ENST00000510472 NFASCO94856 1347 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 KIAA1217Q5T5P2 1943 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 JAK2O60674 1132 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 LGALS2P05162 132 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 SUPT20HL2P0C7V6 817 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 ZNF286BP0CG31 522 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 RAG1P15918 1043 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 HOXC8P31273 242 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 USP11P51784 963 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 EPHB4P54760 987 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 ITGB3BPQ13352 177 aaPredicted RBP13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 HIC1Q14526 733 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 MFSD10Q14728 455 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 KIAA0753Q2KHM9 967 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 MFSD5Q6N075 450 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 SEPT1Q8WYJ6 367 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 ZSCAN31Q96LW9 406 aaPredicted RBP13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 LBHD1Q9BQE6 289 aaPredicted RBP13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 NOC4LQ9BVI4 516 aaKnown RBP13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 KATNAL1Q9BW62 490 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 KCNJ14Q9UNX9 436 aa13.39□□□□□ -0.27
HMGXB3-203ENST00000510472 CYP3A7-CYP3A51PA0A087WV96 503 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 H3BRB1 525 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 ATG7O95352 703 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 CYP3A7P24462 503 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 GDF6Q6KF10 455 aaPredicted RBP13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 C16orf59Q7L2K0 433 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 PLA2G4DQ86XP0 818 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 WASF1Q92558 559 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 VWCEQ96DN2 955 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 MBOAT7Q96N66 472 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 PCYT2Q99447 389 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 LLPHQ9BRT6 129 aaKnown RBP13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 ALG1Q9BT22 464 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 UBE2OQ9C0C9 1292 aaKnown RBP13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 TUT1Q9H6E5 874 aaKnown RBP13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 HDAC6Q9UBN7 1215 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 UMODL1Q5DID0 1318 aa13.38□□□□□ -0.27
HMGXB3-203ENST00000510472 TRIOBPQ9H2D6 2365 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 NOP56O00567 594 aaKnown RBP13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 LGR5O75473 907 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 CYP2C9P11712 490 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 ZNF76P36508 570 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 ADAM17P78536 824 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 OXER1Q8TDS5 423 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 TNFRSF25Q93038 417 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 HIPK3Q9H422 1215 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 UPF2Q9HAU5 1272 aaKnown RBP13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 JPH1Q9HDC5 661 aaPredicted RBP13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 SH2B1Q9NRF2 756 aaPredicted RBP13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 PKD2L1Q9P0L9 805 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 LAMA3Q16787 3333 aa13.37□□□□□ -0.27
HMGXB3-203ENST00000510472 IGKV6D-21A0A0A0MT36 114 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 IPO5O00410 1097 aaKnown RBP13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 CCNE2O96020 404 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 XBP1P17861 261 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 CYP2C18P33260 490 aa13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
HMGXB3-203ENST00000510472 FXR1P51114 621 aaKnown RBP eCLIP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms