RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 PSRC1Q6PGN9 363 aaPredicted RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 RPUSD2Q8IZ73 545 aaKnown RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 PPTC7Q8NI37 304 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 TNFRSF25Q93038 417 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 FAM161BQ96MY7 647 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 NOC4LQ9BVI4 516 aaKnown RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 KATNAL1Q9BW62 490 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 ZMYND12Q9H0C1 365 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 MTIF3Q9H2K0 278 aaKnown RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 RIC8AQ9NPQ8 531 aa10□□□□□ -0.81
PDLIM5-213ENST00000509357 ORC3Q9UBD5 711 aaPredicted RBP10□□□□□ -0.81
PDLIM5-213ENST00000509357 ESYT2A0FGR8 921 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 SMCO2A6NFE2 343 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 FIBPO43427 364 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 PPFIA4O75335 1185 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 DEXIO95424 95 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 FGBP02675 491 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 ZNF286BP0CG31 522 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 UBA1P22314 1058 aaKnown RBP9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 PSEN2P49810 448 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 ADCY7P51828 1080 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 SP4Q02446 784 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 BFSP2Q13515 415 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 NEDD9Q14511 834 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 MFSD10Q14728 455 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 KIAA0753Q2KHM9 967 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 MYSM1Q5VVJ2 828 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 PCNX4Q63HM2 1172 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 XRRA1Q6P2D8 792 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 ZNF365Q70YC5 407 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 CYFIP1Q7L576 1253 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 CCDC155Q8N6L0 562 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 SNX21Q969T3 373 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 SCLYQ96I15 445 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.99□□□□□ -0.819e-7■□□□□ 10.7
PDLIM5-213ENST00000509357 PHF20Q9BVI0 1012 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 IL23AQ9NPF7 189 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 PCDHA6Q9UN73 950 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 PCDHA8Q9Y5H6 950 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 UMODL1Q5DID0 1318 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 MYH15Q9Y2K3 1946 aa9.99□□□□□ -0.81
PDLIM5-213ENST00000509357 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 ZBBXA8MT70 800 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 KIF28PB7ZC32 967 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 CPLX1O14810 134 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 ST18O60284 1047 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 SMAD3P84022 425 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 SP2Q02086 613 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 GUCY1B3Q02153 619 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 NR5A1Q13285 461 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 HSDL1Q3SXM5 330 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 TMEM240Q5SV17 173 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 UTP14CQ5TAP6 766 aaKnown RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 JAKMIP3Q5VZ66 844 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 PPP1R18Q6NYC8 613 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 DEFB128Q7Z7B8 93 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 GIMAP8Q8ND71 665 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 CYP2W1Q8TAV3 490 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 KAT2BQ92831 832 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 CDHR1Q96JP9 859 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 ZSCAN31Q96LW9 406 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 INPP4AQ96PE3 977 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 FTOQ9C0B1 505 aaKnown RBP eCLIP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 GLT8D2Q9H1C3 349 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 SH2B1Q9NRF2 756 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 PKD2L1Q9P0L9 805 aa9.98□□□□□ -0.81
PDLIM5-213ENST00000509357 hCG_1984214I3L0E3 225 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 FOSP01100 380 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 ACTN1P12814 892 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 ITGB5P18084 799 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 ICAM3P32942 547 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 ZNF76P36508 570 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 MTMR1Q13613 665 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 GDF6Q6KF10 455 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 METTL7BQ6UX53 244 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 C16orf59Q7L2K0 433 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 OTOP2Q7RTS6 562 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 ZNF713Q8N859 430 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 DAGLBQ8NCG7 672 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 CCDC12Q8WUD4 166 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 LLPHQ9BRT6 129 aaKnown RBP9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 ANO3Q9BYT9 981 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 WNT8AQ9H1J5 351 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 FOXD4L1Q9NU39 408 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 HDAC6Q9UBN7 1215 aa9.97□□□□□ -0.81
PDLIM5-213ENST00000509357 LAMA2P24043 3122 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-213ENST00000509357 H3BRB1 525 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 K7ELQ4 463 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 F2P00734 622 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 PFKMP08237 780 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 GJB2P29033 226 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 KRT40Q6A162 431 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 FAM109BQ6ICB4 259 aaPredicted RBP9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 SESTD1Q86VW0 696 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 CAGE1Q8TC20 777 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 LENG9Q96B70 501 aa9.96□□□□□ -0.82
PDLIM5-213ENST00000509357 GPRASP2Q96D09 838 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms