RNA–Protein interactions for RNA: ENST00000508708.1

CSNK1G3-204, Transcript of casein kinase 1 gamma 3, humanhuman

TSL 2

Gene CSNK1G3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3-204ENST00000508708 LGALS2P05162 132 aa26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 SREBF1P36956 1147 aa26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 CCL23P55773 120 aa26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 CHMP4BP1P59074 171 aa26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 RNPC3Q96LT9 517 aaKnown RBP26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 SLC26A6Q9BXS9 759 aa26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 HDAC6Q9UBN7 1215 aa26.81■■□□□ 1.88
CSNK1G3-204ENST00000508708 MTMR1Q13613 665 aa26.8■■□□□ 1.88
CSNK1G3-204ENST00000508708 RASIP1Q5U651 963 aa26.8■■□□□ 1.88
CSNK1G3-204ENST00000508708 CRYGNQ8WXF5 182 aa26.8■■□□□ 1.88
CSNK1G3-204ENST00000508708 IL23AQ9NPF7 189 aa26.8■■□□□ 1.88
CSNK1G3-204ENST00000508708 PITPNM1O00562 1244 aa26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 NOP56O00567 594 aaKnown RBP26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 ACRP10323 421 aa26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 HIC1Q14526 733 aa26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 PTGISQ16647 500 aa26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 PSRC1Q6PGN9 363 aaPredicted RBP26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 CCDC12Q8WUD4 166 aaPredicted RBP26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 MXRA8Q9BRK3 442 aa26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 ALG1Q9BT22 464 aa26.79■■□□□ 1.88
CSNK1G3-204ENST00000508708 HOXC8P31273 242 aa26.78■■□□□ 1.88
CSNK1G3-204ENST00000508708 C7orf31Q8N865 590 aa26.78■■□□□ 1.88
CSNK1G3-204ENST00000508708 GIMAP8Q8ND71 665 aaPredicted RBP26.78■■□□□ 1.88
CSNK1G3-204ENST00000508708 CYP2W1Q8TAV3 490 aa26.78■■□□□ 1.88
CSNK1G3-204ENST00000508708 DHX38Q92620 1227 aaKnown RBP26.78■■□□□ 1.88
CSNK1G3-204ENST00000508708 SCLYQ96I15 445 aa26.78■■□□□ 1.88
CSNK1G3-204ENST00000508708 MAFGO15525 162 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 AKAP17AQ02040 695 aaKnown RBP26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 RBL2Q08999 1139 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 JAKMIP3Q5VZ66 844 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 ZNF365Q70YC5 407 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 TRIM50Q86XT4 487 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 KCNH7Q9NS40 1196 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 VPS54Q9P1Q0 977 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 SCN5AQ14524 2016 aa26.77■■□□□ 1.88
CSNK1G3-204ENST00000508708 H3BRB1 525 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 EIF5BO60841 1220 aaKnown RBP26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 SMAD3P84022 425 aaKnown RBP26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 ARHGAP4P98171 946 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 SCRN1Q12765 414 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 STK3Q13188 491 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 CEP55Q53EZ4 464 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 REXO1Q8N1G1 1221 aaKnown RBP26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 TUT1Q9H6E5 874 aaKnown RBP26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 C6orf50Q9HD87 102 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 TPCN1Q9ULQ1 816 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 NOD1Q9Y239 953 aa26.76■■□□□ 1.87
CSNK1G3-204ENST00000508708 SP4Q02446 784 aa26.75■■□□□ 1.87
CSNK1G3-204ENST00000508708 Q7L0L9 218 aa26.75■■□□□ 1.87
CSNK1G3-204ENST00000508708 CCDC148Q8NFR7 591 aa26.75■■□□□ 1.87
CSNK1G3-204ENST00000508708 CAGE1Q8TC20 777 aa26.75■■□□□ 1.87
CSNK1G3-204ENST00000508708 PKD2L1Q9P0L9 805 aa26.75■■□□□ 1.87
CSNK1G3-204ENST00000508708 MEIS1O00470 390 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 CPLX1O14810 134 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 IQCF3P0C7M6 154 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 ARP10275 920 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 GNA11P29992 359 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 AK2P54819 239 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 ZNF200P98182 395 aaPredicted RBP26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 BFSP2Q13515 415 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 C8orf34Q49A92 452 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 TRIM22Q8IYM9 498 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 RASGRP4Q8TDF6 673 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 HERVK_113Q902F9 699 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 WNT8BQ93098 351 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 SH3GLB2Q9NR46 395 aa26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 TRIP12Q14669 1992 aaPredicted RBP26.74■■□□□ 1.87
CSNK1G3-204ENST00000508708 GSTTP1A0A1W2PQM5 241 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 FAM86B1E9PN63 330 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 PFKFB2O60825 505 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 DEXIO95424 95 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 CYP3A4P08684 503 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 FAM86B2P0C5J1 330 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 SSRP1Q08945 709 aaKnown RBP26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 TRIM71Q2Q1W2 868 aaKnown RBP26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 MCTP2Q6DN12 878 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 FAM109BQ6ICB4 259 aaPredicted RBP26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 NIPA1Q7RTP0 329 aa26.73■■□□□ 1.87
CSNK1G3-204ENST00000508708 COL6A3P12111 3177 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 NFASCO94856 1347 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 IGLV3-22A0A075B6J6 115 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 SMIM10L2AP0DMW4 78 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 SMIM10L2BP0DMW5 78 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 TCF7P36402 384 aaPredicted RBP26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 PTK7Q13308 1070 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 ITGB3BPQ13352 177 aaPredicted RBP26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 DEFB123Q8N688 67 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 AFAP1L1Q8TED9 768 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 AGO4Q9HCK5 861 aaKnown RBP26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 CXXC1Q9P0U4 656 aaPredicted RBP26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 TET1Q8NFU7 2136 aa26.72■■□□□ 1.87
CSNK1G3-204ENST00000508708 PFKMP08237 780 aa26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 RFC2P35250 354 aa26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 UTP14CQ5TAP6 766 aaKnown RBP26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 CPLX2Q6PUV4 134 aaKnown RBP26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 TRAF7Q6Q0C0 670 aa26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 CCDC155Q8N6L0 562 aa26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 BICD2Q8TD16 824 aa26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 SEPT1Q8WYJ6 367 aa26.71■■□□□ 1.87
CSNK1G3-204ENST00000508708 AIFM3Q96NN9 605 aa26.71■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms