RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 TTC3P53804 2025 aa10.99□□□□□ -0.65
NEDD9-211ENST00000508546 CHD8Q9HCK8 2581 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 CHD6Q8TD26 2715 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 RSPH10B2B2RC85 870 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 NR3C2P08235 984 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 RSPH10BP0C881 870 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 MX1P20591 662 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 HOXC8P31273 242 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 LTBRP36941 435 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 ZNF200P98182 395 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-211ENST00000508546 HIC1Q14526 733 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-211ENST00000508546 FBXO11Q86XK2 927 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
NEDD9-211ENST00000508546 TMEM192Q8IY95 271 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 OTUD7AQ8TE49 926 aaPredicted RBP10.98□□□□□ -0.65
NEDD9-211ENST00000508546 CNTNAP3BQ96NU0 1288 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 CNTNAP3Q9BZ76 1288 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 CLDND1Q9NY35 253 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 RCAN3Q9UKA8 241 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 MRVI1Q9Y6F6 885 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 ZNF292O60281 2723 aa10.98□□□□□ -0.65
NEDD9-211ENST00000508546 ATRXP46100 2492 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 MBTPS2O43462 519 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 CAND2O75155 1236 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 KDM4AO75164 1064 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 GOLGA8HP0CJ92 632 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 THPOP40225 353 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 CTC1Q2NKJ3 1217 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 KCNV1Q6PIU1 500 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 RPAINQ86UA6 219 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 DGKHQ86XP1 1220 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 TICAM2Q86XR7 235 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 SEPT8Q92599 483 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 EVI5LQ96CN4 794 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 YME1L1Q96TA2 773 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 PXMP2Q9NR77 195 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
NEDD9-211ENST00000508546 SALL3Q9BXA9 1300 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 BAZ2BQ9UIF8 2168 aaKnown RBP10.97□□□□□ -0.65
NEDD9-211ENST00000508546 CEP250Q9BV73 2442 aa10.97□□□□□ -0.65
NEDD9-211ENST00000508546 EP300Q09472 2414 aaPredicted RBP10.96□□□□□ -0.65
NEDD9-211ENST00000508546 C5orf67F2Z3F1 127 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 RB1P06400 928 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 TGFB3P10600 412 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 HSPD1P10809 573 aaKnown RBP10.96□□□□□ -0.65
NEDD9-211ENST00000508546 EIF2AK2P19525 551 aaKnown RBP10.96□□□□□ -0.65
NEDD9-211ENST00000508546 AVPR2P30518 371 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 NBL1P41271 181 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 NT5C2P49902 561 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 ZXDAP98168 799 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 GHRHRQ02643 423 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 DLX2Q07687 328 aaPredicted RBP10.96□□□□□ -0.65
NEDD9-211ENST00000508546 HSDL1Q3SXM5 330 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 MCMDC2Q4G0Z9 681 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 CELF3Q5SZQ8 465 aaKnown RBP10.96□□□□□ -0.65
NEDD9-211ENST00000508546 MFSD6Q6ZSS7 791 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 ADGRF4Q8IZF3 695 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 ASIC4Q96FT7 647 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 C16orf70Q9BSU1 422 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 LMAN2LQ9H0V9 348 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 IRF2BPLQ9H1B7 796 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 CPVLQ9H3G5 476 aa10.96□□□□□ -0.65
NEDD9-211ENST00000508546 LOXHD1Q8IVV2 1947 aa10.96□□□□□ -0.66
NEDD9-211ENST00000508546 KIAA1671Q9BY89 1806 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-211ENST00000508546 C17orf102A2RUQ5 167 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 TBX10O75333 385 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 HSD17B4P51659 736 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 HAND2P61296 217 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 SMAD4Q13485 552 aaKnown RBP10.95□□□□□ -0.66
NEDD9-211ENST00000508546 QRICH1Q2TAL8 776 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 ASPRV1Q53RT3 343 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 CCDC178Q5BJE1 867 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 SAMD3Q8N6K7 520 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 PNMA1Q8ND90 353 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 ESR2Q92731 530 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 APBB2Q92870 758 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 ATP6V0A1Q93050 837 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 RMDN1Q96DB5 314 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 SPATA33Q96N06 139 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 PDCD2LQ9BRP1 358 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 RNF41Q9H4P4 317 aaPredicted RBP10.95□□□□□ -0.66
NEDD9-211ENST00000508546 MAP3K20Q9NYL2 800 aaKnown RBP10.95□□□□□ -0.66
NEDD9-211ENST00000508546 USP24Q9UPU5 2620 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 SPTBN2O15020 2390 aa10.95□□□□□ -0.66
NEDD9-211ENST00000508546 A0A0D9SFI3 127 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 H3BRB1 525 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 STXBP3O00186 592 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 OPLAHO14841 1288 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 TREHO43280 583 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 UPP2O95045 317 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 GGPS1O95749 300 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 CFBP00751 764 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 LINC00271P0C7V0 271 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 STOX1Q6ZVD7 989 aa10.94□□□□□ -0.66
NEDD9-211ENST00000508546 VSIG10LQ86VR7 867 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms