RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 ZNF652Q9Y2D9 606 aa6.21□□□□□ -1.42
PDLIM5-211ENST00000508531 MAPKBP1O60336 1514 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 NUP160Q12769 1436 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 H7BY64 318 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 HGSO14964 777 aaPredicted RBP6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 PLATP00750 562 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 ADAM17P78536 824 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 CHRNA2Q15822 529 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 PRAMEF18Q5VWM3 479 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 STEAP3Q658P3 488 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 HOMEZQ8IX15 550 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 LGI4Q8N135 537 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 LOXL4Q96JB6 756 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 CCDC140Q96MF4 163 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.429e-7■□□□□ 10.7
PDLIM5-211ENST00000508531 NGRNQ9NPE2 291 aaKnown RBP6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 CLDND1Q9NY35 253 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 PCDHB4Q9Y5E5 795 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 PBRM1Q86U86 1689 aa6.2□□□□□ -1.42
PDLIM5-211ENST00000508531 TCRBV5S2A0A599 114 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 GJB6O95452 261 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 TESK1Q15569 626 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 BORAQ6PGQ7 559 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 FAM124AQ86V42 546 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 TOE1Q96GM8 510 aaKnown RBP6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 C1orf159Q96HA4 380 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 DTLQ9NZJ0 730 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 MYRFQ9Y2G1 1151 aa6.19□□□□□ -1.42
PDLIM5-211ENST00000508531 ADCY10Q96PN6 1610 aa6.18□□□□□ -1.42
PDLIM5-211ENST00000508531 TADA3O75528 432 aa6.18□□□□□ -1.42
PDLIM5-211ENST00000508531 GRIA2P42262 883 aa6.18□□□□□ -1.42
PDLIM5-211ENST00000508531 ZNF408Q9H9D4 720 aa6.18□□□□□ -1.42
PDLIM5-211ENST00000508531 CUX1P39880 1505 aa6.18□□□□□ -1.42
PDLIM5-211ENST00000508531 ZNF536O15090 1300 aa6.18□□□□□ -1.42
PDLIM5-211ENST00000508531 WDR97A6NE52 1622 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 DGKIO75912 1065 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 ZNF28P17035 718 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 PPP2R2AP63151 447 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 GNL2Q13823 731 aaKnown RBP6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 SLC10A6Q3KNW5 377 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 EMC4Q5J8M3 183 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 SLC35F1Q5T1Q4 408 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 TEPPQ6URK8 271 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 EEPD1Q7L9B9 569 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 LCORQ96JN0 433 aaPredicted RBP6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 C8orf49Q96NF6 230 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 TMPRSS5Q9H3S3 457 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 CROTQ9UKG9 612 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 SHROOM2Q13796 1616 aa6.17□□□□□ -1.42
PDLIM5-211ENST00000508531 WRNQ14191 1432 aaPredicted RBP eCLIP6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 AGRPO00253 132 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 LRG1P02750 347 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 CYP1A1P04798 512 aaPredicted RBP6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 FGRP09769 529 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 IL13P35225 146 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 LIMS2Q7Z4I7 341 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 SAMD11Q96NU1 681 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 CLIC6Q96NY7 704 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 EPB41L1Q9H4G0 881 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 L2HGDHQ9H9P8 463 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 MYOTQ9UBF9 498 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 NPFFR2Q9Y5X5 522 aa6.16□□□□□ -1.42
PDLIM5-211ENST00000508531 SPATA31D1Q6ZQQ2 1576 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 A0A1W2PQU0 124 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 C9orf118A6NHY6 69 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 B4GALT3O60512 393 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 MSCO60682 206 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 CAPNS1P04632 268 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 MLLT6P55198 1093 aaPredicted RBP6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 CPZQ66K79 652 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 TMC5Q6UXY8 1006 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 TTC9BQ8N6N2 239 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 HNRNPLLQ8WVV9 542 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 KCTD13Q8WZ19 329 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 IER2Q9BTL4 223 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 SSBP3Q9BWW4 388 aaPredicted RBP6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 JAM3Q9BX67 310 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 EPN3Q9H201 632 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 ST7Q9NRC1 585 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 PPARGC1AQ9UBK2 798 aaKnown RBP6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 ST6GALNAC2Q9UJ37 374 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 WASF3Q9UPY6 502 aa6.15□□□□□ -1.42
PDLIM5-211ENST00000508531 ASXL2Q76L83 1435 aa6.15□□□□□ -1.43
PDLIM5-211ENST00000508531 TOP2BQ02880 1626 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 PPRC1Q5VV67 1664 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 TCF3P15923 654 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 ZNF20P17024 532 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 ARID5AQ03989 594 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 MAP4K2Q12851 820 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 GLB1LQ6UWU2 654 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 USP53Q70EK8 1073 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 CELF2-AS1Q8N7Q2 184 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 CHST13Q8NET6 341 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 ZCCHC14Q8WYQ9 949 aaKnown RBP6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 TMEM209Q96SK2 561 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 TINF2Q9BSI4 451 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 TMEM168Q9H0V1 697 aa6.14□□□□□ -1.43
PDLIM5-211ENST00000508531 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms