RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 MYOTQ9UBF9 498 aa7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 ZDHHC9Q9Y397 364 aa7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 PCDHA2Q9Y5H9 948 aa7.28□□□□□ -1.24
TRAPPC13-209ENST00000508304 CPP00450 1065 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 ITGAVP06756 1048 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 LCP1P13796 627 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 LTBRP36941 435 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 PRSS53Q2L4Q9 553 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 ZNF227Q86WZ6 799 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 PROSER1Q86XN7 944 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 NUDT10Q8NFP7 164 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 PHOSPHO1Q8TCT1 267 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 NUDT11Q96G61 164 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 EPB41L1Q9H4G0 881 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 ING1Q9UK53 422 aaPredicted RBP7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 STRIP2Q9ULQ0 834 aa7.27□□□□□ -1.25
TRAPPC13-209ENST00000508304 DGKIO75912 1065 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 KLHL18O94889 574 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 CNOT4O95628 575 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 KRTAP1-1Q07627 177 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 SF1Q15637 639 aaKnown RBP7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 DENND5AQ6IQ26 1287 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 PPIL6Q8IXY8 311 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 CCDC140Q96MF4 163 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 SMOC1Q9H4F8 434 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 CLDND1Q9NY35 253 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 RBPJLQ9UBG7 517 aa7.26□□□□□ -1.25
TRAPPC13-209ENST00000508304 CHAMP1Q96JM3 812 aa7.25□□□□□ -1.25
TRAPPC13-209ENST00000508304 CDIP1Q9H305 208 aa7.25□□□□□ -1.25
TRAPPC13-209ENST00000508304 SEC61A2Q9H9S3 476 aa7.25□□□□□ -1.25
TRAPPC13-209ENST00000508304 ASH2LQ9UBL3 628 aa7.25□□□□□ -1.25
TRAPPC13-209ENST00000508304 GFRA1P56159 465 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 CYP4F22Q6NT55 531 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 NT5DC4Q86YG4 428 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 DTX3Q8N9I9 347 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 TTLL11Q8NHH1 800 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 C1orf159Q96HA4 380 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 NPFFR2Q9Y5X5 522 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 SLC4A7Q9Y6M7 1214 aa7.24□□□□□ -1.25
TRAPPC13-209ENST00000508304 MAFKO60675 156 aa7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 SV2CQ496J9 727 aa7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 C6orf15Q6UXA7 325 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 Q6ZUG5 572 aa7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 RALYLQ86SE5 291 aaKnown RBP7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 TMEM145Q8NBT3 493 aa7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 ANAPC16Q96DE5 110 aa7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 DLL4Q9NR61 685 aa7.23□□□□□ -1.25
TRAPPC13-209ENST00000508304 FOXS1O43638 330 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 CAPNS1P04632 268 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 CHGBP05060 677 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 KCNJ6P48051 423 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 HDLBPQ00341 1268 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 SMAD2Q15796 467 aaKnown RBP7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 TCTN3Q6NUS6 607 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 AJUBAQ96IF1 538 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 GNRHR2Q96P88 292 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 LRP2BPQ9P2M1 347 aa7.22□□□□□ -1.25
TRAPPC13-209ENST00000508304 KNG1P01042 644 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 HS1BP3Q53T59 392 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 SLC35F1Q5T1Q4 408 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 PHF19Q5T6S3 580 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 VASNQ6EMK4 673 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 FAM178BQ8IXR5 827 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 ZNF341Q9BYN7 854 aa7.21□□□□□ -1.26
TRAPPC13-209ENST00000508304 KRIT1O00522 736 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 SUSD5O60279 629 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 CSF2RBP32927 897 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 FOXE3Q13461 319 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 PRKD1Q15139 912 aaPredicted RBP7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 MIIPQ5JXC2 388 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 TRIM48Q8IWZ4 208 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 CLEC4DQ8WXI8 215 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 LMF1Q96S06 567 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 SLC6A20Q9NP91 592 aa7.2□□□□□ -1.26
TRAPPC13-209ENST00000508304 B2RBV5 119 aa7.19□□□□□ -1.26
TRAPPC13-209ENST00000508304 NPIPB8E9PQR5 432 aa7.19□□□□□ -1.26
TRAPPC13-209ENST00000508304 RNF207Q6ZRF8 634 aa7.19□□□□□ -1.26
TRAPPC13-209ENST00000508304 SLC27A2O14975 620 aa7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 FHL2Q14192 279 aa7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 PIP4K2CQ8TBX8 421 aa7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 ZNF503Q96F45 646 aa7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 PDGFDQ9GZP0 370 aaPredicted RBP7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 KATNBL1Q9H079 304 aa7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 KCND1Q9NSA2 647 aa7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 ZFR2Q9UPR6 939 aaKnown RBP7.18□□□□□ -1.26
TRAPPC13-209ENST00000508304 SMAD7O15105 426 aaKnown RBP7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 CKMP06732 381 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 GRIN1Q05586 938 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 MRM1Q6IN84 353 aaKnown RBP7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 GPR155Q7Z3F1 870 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 REXO1L1PQ8IX06 675 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 EDAQ92838 391 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 LRRC37BQ96QE4 947 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 ADOQ96SZ5 270 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 JAM3Q9BX67 310 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 ACTR10Q9NZ32 417 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 ZFP69BQ9UJL9 534 aa7.17□□□□□ -1.26
TRAPPC13-209ENST00000508304 FBXO21O94952 628 aa7.16□□□□□ -1.26
TRAPPC13-209ENST00000508304 FAHP16930 419 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms