RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 GNAT1P11488 350 aa17.82■□□□□ 0.44
COL1A1-211ENST00000507689 ARHGAP4P98171 946 aa17.82■□□□□ 0.44
COL1A1-211ENST00000507689 GALNT17Q6IS24 598 aa17.82■□□□□ 0.44
COL1A1-211ENST00000507689 RPUSD2Q8IZ73 545 aaKnown RBP17.82■□□□□ 0.44
COL1A1-211ENST00000507689 RNPC3Q96LT9 517 aaKnown RBP17.82■□□□□ 0.44
COL1A1-211ENST00000507689 TPCN1Q9ULQ1 816 aa17.82■□□□□ 0.44
COL1A1-211ENST00000507689 H3BRB1 525 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 SEC24BO95487 1268 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 ITGB5P18084 799 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 CYP2C18P33260 490 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 CLK2P49760 499 aaKnown RBP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 FXR1P51114 621 aaKnown RBP eCLIP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 SCRN1Q12765 414 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 LRIT3Q3SXY7 679 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 UTP14CQ5TAP6 766 aaKnown RBP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 PSRC1Q6PGN9 363 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 SESTD1Q86VW0 696 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 SEPT1Q8WYJ6 367 aa17.81■□□□□ 0.44
COL1A1-211ENST00000507689 TNPO1Q92973 898 aaKnown RBP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 TUT1Q9H6E5 874 aaKnown RBP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 JPH1Q9HDC5 661 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-211ENST00000507689 LGALS2P05162 132 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 CYP2C9P11712 490 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 HOXD8P13378 290 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-211ENST00000507689 ITGB8P26012 769 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 SETQ01105 290 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-211ENST00000507689 NIPA1Q7RTP0 329 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 KAT2BQ92831 832 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 GLG1Q92896 1179 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 IL17RAQ96F46 866 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 GPR20Q99678 358 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 NOC4LQ9BVI4 516 aaKnown RBP17.8■□□□□ 0.44
COL1A1-211ENST00000507689 AZI2Q9H6S1 392 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 BRMS1Q9HCU9 246 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 KCNH7Q9NS40 1196 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 HDAC6Q9UBN7 1215 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 PCDHA4Q9UN74 947 aa17.8■□□□□ 0.44
COL1A1-211ENST00000507689 CSF2RAP15509 400 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 KCNA2P16389 499 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 CCL23P55773 120 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 SEMA3FQ13275 785 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 TRIM29Q14134 588 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 SHHQ15465 462 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 PLA2G4DQ86XP0 818 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 CAGE1Q8TC20 777 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 PCDH10Q9P2E7 1040 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 SLC9A2Q9UBY0 812 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 GTF2IRD1Q9UHL9 959 aa17.79■□□□□ 0.44
COL1A1-211ENST00000507689 STK36Q9NRP7 1315 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 LTBP2Q14767 1821 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 C17orf102A2RUQ5 167 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 PITPNM1O00562 1244 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 CYP3A4P08684 503 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 RFC2P35250 354 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 TCF7P36402 384 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-211ENST00000507689 BLIDQ8IZY5 108 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 PPP1R13LQ8WUF5 828 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 SMARCAD1Q9H4L7 1026 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 IL23AQ9NPF7 189 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 ORC3Q9UBD5 711 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-211ENST00000507689 LIMCH1Q9UPQ0 1083 aa17.78■□□□□ 0.44
COL1A1-211ENST00000507689 NFASCO94856 1347 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 MYH7BA7E2Y1 1941 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 HAS3O00219 553 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 MEIS1O00470 390 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 ATP9AO75110 1047 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 PARNO95453 639 aaKnown RBP17.77■□□□□ 0.44
COL1A1-211ENST00000507689 FGBP02675 491 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 PFKMP08237 780 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 ACTN1P12814 892 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 GDF6Q6KF10 455 aaPredicted RBP17.77■□□□□ 0.44
COL1A1-211ENST00000507689 ATP6V0A1Q93050 837 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 GTF3C6Q969F1 213 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 ZNF577Q9BSK1 485 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 C16orf70Q9BSU1 422 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 AGO4Q9HCK5 861 aaKnown RBP17.77■□□□□ 0.44
COL1A1-211ENST00000507689 ERAP1Q9NZ08 941 aa17.77■□□□□ 0.44
COL1A1-211ENST00000507689 CCDC194A0A1B0GVG4 234 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 USP11P51784 963 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 PTK7Q13308 1070 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 PRR16Q569H4 304 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 C9orf50Q5SZB4 431 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 KRT25Q7Z3Z0 450 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 NECAB1Q8N987 351 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 IL27Q8NEV9 243 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 CYP2W1Q8TAV3 490 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 RASGRP4Q8TDF6 673 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 AFAP1L1Q8TED9 768 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 ZSCAN31Q96LW9 406 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-211ENST00000507689 FTOQ9C0B1 505 aaKnown RBP eCLIP17.76■□□□□ 0.43
COL1A1-211ENST00000507689 TBC1D22BQ9NU19 505 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 SCN10AQ9Y5Y9 1956 aa17.76■□□□□ 0.43
COL1A1-211ENST00000507689 IPO5O00410 1097 aaKnown RBP17.75■□□□□ 0.43
COL1A1-211ENST00000507689 ST18O60284 1047 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 SMIM10L2AP0DMW4 78 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 SMIM10L2BP0DMW5 78 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 ARP10275 920 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 ACRP10323 421 aa17.75■□□□□ 0.43
COL1A1-211ENST00000507689 NONOQ15233 471 aaKnown RBP eCLIP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms