RNA–Protein interactions for RNA: ENST00000507485.1

RPS3A-206, Transcript of ribosomal protein S3A, humanhuman

TSL 1 (best)

Gene RPS3A, Length 1,526 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3A-206ENST00000507485 SYMPKQ92797 1274 aaKnown RBP10.54□□□□□ -0.72
RPS3A-206ENST00000507485 NECAB3Q96P71 396 aaPredicted RBP10.54□□□□□ -0.72
RPS3A-206ENST00000507485 MTIF3Q9H2K0 278 aaKnown RBP10.54□□□□□ -0.72
RPS3A-206ENST00000507485 TOR4AQ9NXH8 423 aa10.54□□□□□ -0.72
RPS3A-206ENST00000507485 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
RPS3A-206ENST00000507485 RAPGEFL1Q9UHV5 662 aa10.54□□□□□ -0.72
RPS3A-206ENST00000507485 TCF20Q9UGU0 1960 aaKnown RBP10.54□□□□□ -0.72
RPS3A-206ENST00000507485 AXIN1O15169 862 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 PPP1R11O60927 126 aaPredicted RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 MMP3P08254 477 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 SUPT20HL2P0C7V6 817 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 TFF2Q03403 129 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 QRICH1Q2TAL8 776 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 GDF6Q6KF10 455 aaPredicted RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 NFRKBQ6P4R8 1299 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 CWC27Q6UX04 472 aaKnown RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 RGS22Q8NE09 1264 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 ADAMTS19Q8TE59 1207 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 ATXN2LQ8WWM7 1075 aaKnown RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 ANKS1AQ92625 1134 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 ESR2Q92731 530 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 WNT8BQ93098 351 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 OSBPL3Q9H4L5 887 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 JMJD4Q9H9V9 463 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 ZSWIM5Q9P217 1185 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 MYH6P13533 1939 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 NKRFO15226 690 aaKnown RBP eCLIP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 PCP11498 1178 aaKnown RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 SMCPP49901 116 aaPredicted RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 CHMP4BP1P59074 171 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 TAP1Q03518 808 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 HIC1Q14526 733 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 GPATCH4Q5T3I0 446 aaKnown RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 SEPT14Q6ZU15 432 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 CHD1LQ86WJ1 897 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 TICAM2Q86XR7 235 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 MICALL1Q8N3F8 863 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 STAG2Q8N3U4 1231 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 ZSCAN10Q96SZ4 725 aaPredicted RBP10.53□□□□□ -0.72
RPS3A-206ENST00000507485 MTCH2Q9Y6C9 303 aa10.53□□□□□ -0.72
RPS3A-206ENST00000507485 LCHNA4D1U4 455 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 ZNF213O14771 459 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 PFKMP08237 780 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 EIF2AK2P19525 551 aaKnown RBP10.52□□□□□ -0.73
RPS3A-206ENST00000507485 KCNQ1P51787 676 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 NUCB1Q02818 461 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 TMEM67Q5HYA8 995 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 CYB5R4Q7L1T6 521 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 CHST3Q7LGC8 479 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 IL31RAQ8NI17 732 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 EXOC6Q8TAG9 804 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 RNF41Q9H4P4 317 aaPredicted RBP10.52□□□□□ -0.73
RPS3A-206ENST00000507485 VAT1LQ9HCJ6 419 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 TAF6LQ9Y6J9 622 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 ABCB11O95342 1321 aa10.52□□□□□ -0.73
RPS3A-206ENST00000507485 BDP1A6H8Y1 2624 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 MYH7BA7E2Y1 1941 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 WIPF1O43516 503 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 LPXNO60711 386 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 NBNO60934 754 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 BMP1P13497 986 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 DEFB103AP81534 67 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 MRPS5P82675 430 aaKnown RBP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 ZNF200P98182 395 aaPredicted RBP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 PTPN11Q06124 597 aaPredicted RBP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 MBTPS1Q14703 1052 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 SEC23AQ15436 765 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 PTGISQ16647 500 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 TRIM71Q2Q1W2 868 aaKnown RBP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 HERC6Q8IVU3 1022 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 GPKOWQ92917 476 aaPredicted RBP eCLIP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 RMDN3Q96TC7 470 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 BCAS3Q9H6U6 928 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 KAT14Q9H8E8 782 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 SENP2Q9HC62 589 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 HDAC6Q9UBN7 1215 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 DDX41Q9UJV9 622 aaKnown RBP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 FCF1Q9Y324 198 aaKnown RBP10.51□□□□□ -0.73
RPS3A-206ENST00000507485 RAD50Q92878 1312 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 XIRP2A4UGR9 3374 aa10.51□□□□□ -0.73
RPS3A-206ENST00000507485 NCOR1O75376 2440 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 SORBS3O60504 671 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 KPNA6O60684 536 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 GH1P01241 217 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 ZNF286BP0CG31 522 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 POU3F3P20264 500 aaPredicted RBP10.5□□□□□ -0.73
RPS3A-206ENST00000507485 RFC2P35250 354 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 HSD17B4P51659 736 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 WDR5P61964 334 aaKnown RBP10.5□□□□□ -0.73
RPS3A-206ENST00000507485 INSM1Q01101 510 aaPredicted RBP10.5□□□□□ -0.73
RPS3A-206ENST00000507485 ASPRV1Q53RT3 343 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 SESTD1Q86VW0 696 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 FBXO11Q86XK2 927 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 NSUN6Q8TEA1 469 aaKnown RBP10.5□□□□□ -0.73
RPS3A-206ENST00000507485 MTMR8Q96EF0 704 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 SLC9A7Q96T83 725 aa10.5□□□□□ -0.73
RPS3A-206ENST00000507485 UHRF1Q96T88 793 aaPredicted RBP10.5□□□□□ -0.73
RPS3A-206ENST00000507485 DSCC1Q9BVC3 393 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms